Gene Slin_5787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5787 
Symbol 
ID8729562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7023671 
End bp7024333 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content50% 
IMG OID 
Product50S ribosomal protein L3 
Protein accessionYP_003390551 
Protein GI284040621 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0786499 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACCT ATTTTTTACC TGCTTACTTT AAACAAACAC AAATGTCTGG TTTAATTGGC 
AAGAAAATCG GGATGACCAG CGTGTACAAT GCGGACGGGC AGGCTCTGGC ATGTACAGTG
ATTGAGACGG GTCCCTGTGT CGTAACTCAA GTTCGTAGCG TCGAGAAAGA TGGCTACACA
GCTGTGCAGC TGGGTTATGG CGACAAGAAA GAAAAGCACA GCAACAAGCC GGAGATGGGC
CACTTCAAAA AAGCAGGCAC CACACCTAAG CGGAAACTGG TTGAATTCAA AGAATTCGAA
CAGGAACTTG CATTAGGTAC AACTCTTACG GTGGCCGACG TATTTGCAGA AACTGACTTC
GTTGACGTAG TCGGAACAGC TAAAGGTCGT GGTTTCCAGG GCGTTGTGAA ACGTCACGGA
TTCGGTGGTG TAGGCGGTCA AACGCACGGT CAGCATAACC GGGGTCGTCA CCCAGGTTCG
ATCGGTGCCT GTTCGTTCCC ATCGCGTGTG TTCAAAGGTC TTCGGATGGC CGGCCGTATG
GGCGGCAACC GTGTGAAGGT TCAAAACCTA CGCGTTTTGC GTGTTCTGCC TGAGCAAAAC
CTGCTCGTTG TTAGCGGTTC AATTCCAGGA GCCAAAAATT CATACGTTAT TATCGAGAAG
TAG
 
Protein sequence
MNTYFLPAYF KQTQMSGLIG KKIGMTSVYN ADGQALACTV IETGPCVVTQ VRSVEKDGYT 
AVQLGYGDKK EKHSNKPEMG HFKKAGTTPK RKLVEFKEFE QELALGTTLT VADVFAETDF
VDVVGTAKGR GFQGVVKRHG FGGVGGQTHG QHNRGRHPGS IGACSFPSRV FKGLRMAGRM
GGNRVKVQNL RVLRVLPEQN LLVVSGSIPG AKNSYVIIEK