Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5787 |
Symbol | |
ID | 8729562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7023671 |
End bp | 7024333 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | 50S ribosomal protein L3 |
Protein accession | YP_003390551 |
Protein GI | 284040621 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0786499 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACCT ATTTTTTACC TGCTTACTTT AAACAAACAC AAATGTCTGG TTTAATTGGC AAGAAAATCG GGATGACCAG CGTGTACAAT GCGGACGGGC AGGCTCTGGC ATGTACAGTG ATTGAGACGG GTCCCTGTGT CGTAACTCAA GTTCGTAGCG TCGAGAAAGA TGGCTACACA GCTGTGCAGC TGGGTTATGG CGACAAGAAA GAAAAGCACA GCAACAAGCC GGAGATGGGC CACTTCAAAA AAGCAGGCAC CACACCTAAG CGGAAACTGG TTGAATTCAA AGAATTCGAA CAGGAACTTG CATTAGGTAC AACTCTTACG GTGGCCGACG TATTTGCAGA AACTGACTTC GTTGACGTAG TCGGAACAGC TAAAGGTCGT GGTTTCCAGG GCGTTGTGAA ACGTCACGGA TTCGGTGGTG TAGGCGGTCA AACGCACGGT CAGCATAACC GGGGTCGTCA CCCAGGTTCG ATCGGTGCCT GTTCGTTCCC ATCGCGTGTG TTCAAAGGTC TTCGGATGGC CGGCCGTATG GGCGGCAACC GTGTGAAGGT TCAAAACCTA CGCGTTTTGC GTGTTCTGCC TGAGCAAAAC CTGCTCGTTG TTAGCGGTTC AATTCCAGGA GCCAAAAATT CATACGTTAT TATCGAGAAG TAG
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Protein sequence | MNTYFLPAYF KQTQMSGLIG KKIGMTSVYN ADGQALACTV IETGPCVVTQ VRSVEKDGYT AVQLGYGDKK EKHSNKPEMG HFKKAGTTPK RKLVEFKEFE QELALGTTLT VADVFAETDF VDVVGTAKGR GFQGVVKRHG FGGVGGQTHG QHNRGRHPGS IGACSFPSRV FKGLRMAGRM GGNRVKVQNL RVLRVLPEQN LLVVSGSIPG AKNSYVIIEK
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