Gene Slin_5784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5784 
Symbol 
ID8729559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7021892 
End bp7022716 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content52% 
IMG OID 
Productribosomal protein L2 
Protein accessionYP_003390548 
Protein GI284040618 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.091769 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGTTA AAAAACTAAG ACCAATAACG CCGAGTACAC GTTTTCGCGT GGCACCCGAC 
TTTGCGGAAA TAACAGCCTC CAAGCCAGAA AAAAGTCTGC TGGAGCCCAT TAAGAGAACC
GGTGGCCGTA ATAACGAAGG TCACCGCACT ATGCGCTACA TTGGAGGAGG TCACAAGCGG
CAATACCGTA TTATTGACTT CAAGCGCGAT AAAGTCGGCC AGCCTGCCGA AGTTTTGACT
GTAGAATACG ATCCAAACCG TACAGCACGC ATCGCTTTGG TGCAATATGC TGACGGCGAA
AAACGCTACA TCATCGCACC ACAGGGTATC ACCGTAGGCC AGACCATCCG GTCGGGTGAA
GGGTCAACTC CCGATGTTGG TAACGCATTA CCACTGGCTC TGATGCCAAT TGGTACCATC
GTTCACAACA TCGAATTGAC ACCGGGTAAA GGTGGTGCCA TGGCCCGTTC GGCTGGCACA
TACGCCCAGT TGGTTGGTCG TGAAGACAAA TACGCTATCC TGCGTTTACC TTCAGGTGAA
ACACGCCGGG TTCTGAGCGC AGGCATGGCA ACGGTAGGTT CGGTATCAAA CCCCGATCAC
ATGAACGTTG TCGTCGGTAA AGCTGGTCGT AATCGCTGGT TAGGTCGTCG TCCCCGTGTT
CGTGCGGTAG TTATGAACCC TGTCGATCAC CCAATGGGTG GTGGTGAAGG TCGGGCATCG
GGTGGTCACC CACGCTCACG CAATGGCCAG TTTGCGAAAG GTCAGAAGAC CCGTAACAAG
AACAAGGCAT CTGAAAGTAT GATTATTAGC CGACGCAAAA AGTAA
 
Protein sequence
MGVKKLRPIT PSTRFRVAPD FAEITASKPE KSLLEPIKRT GGRNNEGHRT MRYIGGGHKR 
QYRIIDFKRD KVGQPAEVLT VEYDPNRTAR IALVQYADGE KRYIIAPQGI TVGQTIRSGE
GSTPDVGNAL PLALMPIGTI VHNIELTPGK GGAMARSAGT YAQLVGREDK YAILRLPSGE
TRRVLSAGMA TVGSVSNPDH MNVVVGKAGR NRWLGRRPRV RAVVMNPVDH PMGGGEGRAS
GGHPRSRNGQ FAKGQKTRNK NKASESMIIS RRKK