Gene Slin_5780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5780 
Symbol 
ID8729555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7019693 
End bp7020124 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content53% 
IMG OID 
Productribosomal protein L16 
Protein accessionYP_003390544 
Protein GI284040614 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.742745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.418872 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACAGC CAAAAAGAAC TAAATTCCGT AAACAACATA AAGGCAGGAT TCCAGGTATC 
GCATCACGCG GCCATGAAAT CGCCTTCGGA ACGTTCGGCA TCAAATCACT GGAACCCGGC
CGGATTACCG CCCGCCAGAT TGAAGCCGCT CGTATTTCCG TAACGCGGGC AATGAAACGC
GAAGGCCAGG TTTGGATTCG CATATTCCCC GACAAACCAA TCACCAAGAA GCCAGCCGAA
GTTCGGATGG GTAAAGGTAA GGGTGCCCCC GAGTATTGGG TAGCCGTAGT AAAGCCCGGC
ACGATTATGT TCGAAACGAC GGGCGTTGAT CTGGCAACGG GTATGGAAGC CCTGCGCCTG
GCCGCTCAGA AATTGCCAGT TCGGACCAAG TTTGTTGTCC GGCGTGATTA TCAGGAGCAA
GTCGAAGACT AG
 
Protein sequence
MLQPKRTKFR KQHKGRIPGI ASRGHEIAFG TFGIKSLEPG RITARQIEAA RISVTRAMKR 
EGQVWIRIFP DKPITKKPAE VRMGKGKGAP EYWVAVVKPG TIMFETTGVD LATGMEALRL
AAQKLPVRTK FVVRRDYQEQ VED