Gene Slin_5778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5778 
Symbol 
ID8729553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7019102 
End bp7019464 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content51% 
IMG OID 
Product30S ribosomal protein S17 
Protein accessionYP_003390542 
Protein GI284040612 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.274363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.420923 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAGC AACAAGCACC AGCACCACAG GAGGAAGCAA CCCCGGTGGC AGCAGCAACA 
GAACAGCCTG CCGCAGCCGC TCCAGCAACG AGCGCTACTG CAGAGGCTTC GGAGCGCAAC
GCTCGGAAAG AGCGTATCGG ACGGGTGACC AGCAATAAAA TGCAGAAGAC CATCACTGTA
GCGATTGATC GCAAAGTGAA ACACCCGATG TATGGCAAGT TCATGAACAA GACGAAAAAA
CTGACGGTTC ATGACGAGAA AAATGAGTGT GGTATTGGTG ACACGGTTCG TGTTATGGAA
ACCCGCCCAT TAAGCAAGAA CAAGCGTTGG CGTTTAGTCG AAATCATCGA AAAAGCGAAG
TAA
 
Protein sequence
MEEQQAPAPQ EEATPVAAAT EQPAAAAPAT SATAEASERN ARKERIGRVT SNKMQKTITV 
AIDRKVKHPM YGKFMNKTKK LTVHDEKNEC GIGDTVRVME TRPLSKNKRW RLVEIIEKAK