Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5767 |
Symbol | |
ID | 8729542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7013255 |
End bp | 7014574 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | preprotein translocase, SecY subunit |
Protein accession | YP_003390531 |
Protein GI | 284040601 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.800902 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCGAC TCATCACCAC GTTTAAAAAT ATTTTTGCAA TTGACGAGTT GCGGGGTCGA ATCCTGAACA CGTTGTTGTT CATAACGGCG TTTCGTCTTG GCTCGGCTAT TGTACTGCCT GGTGTTGATC CAAATAAACT GAATCTTAAT CCGCAGGGAT TGCTTGGTTT GTTGGATACC TTTTTAGGTG GTGCGTTCAG CAAAGCGTCA ATTTTTGCAT TGGGGATTAT GCCGTACATT TCGGCCTCAA TTGCCATTCA ATTATTAACG CTGGCATTGC CTTACTTCCA GAAAATGCAG AAGGAAGGTG AGTCAGGACG TAAGCGACTG AATCAAATTA CGCGTGTATT AACAATTGGT GTAACGGCCG TACAGGCGGT TACTTATGTT CGTACAACGA TTCCAGCTGA AGCGCTGCTA ATTGACCGCG GTTTATTTAC CATTTCATCC TTATTCATCC TGACAGCTGG CACTATTTTC TGTATGTGGC TGGGTGAGCG GATTACGGAT AAAGGCATTG GCAATGGTAT CTCAATGATC ATTATGATCG GGATCGTGTC GCGGCTACCA GGTGCTATTT ACGGTGAAGC GTTATCGCGT GGTACCGGTG GTTCGCTGAT TTTCGTTCTT GAATTAGTTG GTTTGTTCTT CGTCATTATG GGTGCTGTTG TCCTGACACA AGCAGTACGA CGAATCCCAA TCCAATACGC CAAGCAGGTA ATTGGCAATA AAGTTGTAGG TGGCCAACGG CAGTATCTAC CATTAAAATT AAATGCCGCT GGTGTTATGC CTATCATCTT TGCTCAGGCA CTGATGTTTA TTCCGACTTA CGTTGCCGGT CTGTTTGCTG AAAAAAGCGA TTTCGCTGCC AGCGTTCAAA ACGCGTTTCA AAGCTATACG ACCTGGCAGT ATAACCTGCT GTTCTCACTG TTGATTATCA TCTTTACGTT TTTCTACACC GCTATCTCGG TTAACCCCGT TCAGATTGCC GATGATATGA AGCGTAGTGG TGGTTTCATT CCTGGCGTTA AGCCGGGCAT TCAGACTTCG GAGTACATTG GTACTGTATT GGATCGTATC ACCTTACCGG GAGCCGTTAT GCTCGCCATC GTTGCTATTC TGCCAGCCAT TGCCAATTTG TTGGGCATGA CCAGTGGATT TGCGCAATTC TTTGGCGGAA CATCTTTGCT GATTATGGTA GGTGTAGTGC TTGATACGCT ACAGCAAGTA GAAAGCTATC TATTGATGCG CCGGTATGAA GGTCTGATGA AATCAGGTCG CGTACAGGGC CGTGCCAATA GCGAGACAGT AGCCGCCTAA
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Protein sequence | MNRLITTFKN IFAIDELRGR ILNTLLFITA FRLGSAIVLP GVDPNKLNLN PQGLLGLLDT FLGGAFSKAS IFALGIMPYI SASIAIQLLT LALPYFQKMQ KEGESGRKRL NQITRVLTIG VTAVQAVTYV RTTIPAEALL IDRGLFTISS LFILTAGTIF CMWLGERITD KGIGNGISMI IMIGIVSRLP GAIYGEALSR GTGGSLIFVL ELVGLFFVIM GAVVLTQAVR RIPIQYAKQV IGNKVVGGQR QYLPLKLNAA GVMPIIFAQA LMFIPTYVAG LFAEKSDFAA SVQNAFQSYT TWQYNLLFSL LIIIFTFFYT AISVNPVQIA DDMKRSGGFI PGVKPGIQTS EYIGTVLDRI TLPGAVMLAI VAILPAIANL LGMTSGFAQF FGGTSLLIMV GVVLDTLQQV ESYLLMRRYE GLMKSGRVQG RANSETVAA
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