Gene Slin_5767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5767 
Symbol 
ID8729542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7013255 
End bp7014574 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content46% 
IMG OID 
Productpreprotein translocase, SecY subunit 
Protein accessionYP_003390531 
Protein GI284040601 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.800902 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGAC TCATCACCAC GTTTAAAAAT ATTTTTGCAA TTGACGAGTT GCGGGGTCGA 
ATCCTGAACA CGTTGTTGTT CATAACGGCG TTTCGTCTTG GCTCGGCTAT TGTACTGCCT
GGTGTTGATC CAAATAAACT GAATCTTAAT CCGCAGGGAT TGCTTGGTTT GTTGGATACC
TTTTTAGGTG GTGCGTTCAG CAAAGCGTCA ATTTTTGCAT TGGGGATTAT GCCGTACATT
TCGGCCTCAA TTGCCATTCA ATTATTAACG CTGGCATTGC CTTACTTCCA GAAAATGCAG
AAGGAAGGTG AGTCAGGACG TAAGCGACTG AATCAAATTA CGCGTGTATT AACAATTGGT
GTAACGGCCG TACAGGCGGT TACTTATGTT CGTACAACGA TTCCAGCTGA AGCGCTGCTA
ATTGACCGCG GTTTATTTAC CATTTCATCC TTATTCATCC TGACAGCTGG CACTATTTTC
TGTATGTGGC TGGGTGAGCG GATTACGGAT AAAGGCATTG GCAATGGTAT CTCAATGATC
ATTATGATCG GGATCGTGTC GCGGCTACCA GGTGCTATTT ACGGTGAAGC GTTATCGCGT
GGTACCGGTG GTTCGCTGAT TTTCGTTCTT GAATTAGTTG GTTTGTTCTT CGTCATTATG
GGTGCTGTTG TCCTGACACA AGCAGTACGA CGAATCCCAA TCCAATACGC CAAGCAGGTA
ATTGGCAATA AAGTTGTAGG TGGCCAACGG CAGTATCTAC CATTAAAATT AAATGCCGCT
GGTGTTATGC CTATCATCTT TGCTCAGGCA CTGATGTTTA TTCCGACTTA CGTTGCCGGT
CTGTTTGCTG AAAAAAGCGA TTTCGCTGCC AGCGTTCAAA ACGCGTTTCA AAGCTATACG
ACCTGGCAGT ATAACCTGCT GTTCTCACTG TTGATTATCA TCTTTACGTT TTTCTACACC
GCTATCTCGG TTAACCCCGT TCAGATTGCC GATGATATGA AGCGTAGTGG TGGTTTCATT
CCTGGCGTTA AGCCGGGCAT TCAGACTTCG GAGTACATTG GTACTGTATT GGATCGTATC
ACCTTACCGG GAGCCGTTAT GCTCGCCATC GTTGCTATTC TGCCAGCCAT TGCCAATTTG
TTGGGCATGA CCAGTGGATT TGCGCAATTC TTTGGCGGAA CATCTTTGCT GATTATGGTA
GGTGTAGTGC TTGATACGCT ACAGCAAGTA GAAAGCTATC TATTGATGCG CCGGTATGAA
GGTCTGATGA AATCAGGTCG CGTACAGGGC CGTGCCAATA GCGAGACAGT AGCCGCCTAA
 
Protein sequence
MNRLITTFKN IFAIDELRGR ILNTLLFITA FRLGSAIVLP GVDPNKLNLN PQGLLGLLDT 
FLGGAFSKAS IFALGIMPYI SASIAIQLLT LALPYFQKMQ KEGESGRKRL NQITRVLTIG
VTAVQAVTYV RTTIPAEALL IDRGLFTISS LFILTAGTIF CMWLGERITD KGIGNGISMI
IMIGIVSRLP GAIYGEALSR GTGGSLIFVL ELVGLFFVIM GAVVLTQAVR RIPIQYAKQV
IGNKVVGGQR QYLPLKLNAA GVMPIIFAQA LMFIPTYVAG LFAEKSDFAA SVQNAFQSYT
TWQYNLLFSL LIIIFTFFYT AISVNPVQIA DDMKRSGGFI PGVKPGIQTS EYIGTVLDRI
TLPGAVMLAI VAILPAIANL LGMTSGFAQF FGGTSLLIMV GVVLDTLQQV ESYLLMRRYE
GLMKSGRVQG RANSETVAA