Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5749 |
Symbol | |
ID | 8729524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6991839 |
End bp | 6993149 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003390513 |
Protein GI | 284040583 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCAAAAT TTCCAACCAG CTACCGATGG CAGATGACCG CCTTGCTTTT TGTGGCCACC ACCATCAACT ACCTGGATCG GCAGGTTATC AGCCTGTTAA AACCAACCCT GGAAAAAGTC TTTGTCTGGA CAGAAACGGA CTACAGCCAT GTCGTTATGG CGTTTCAAGG CGCTTATGCC CTCAGTTTCA TTGGCTTTGG CTGGGCAATT GACCGGATTG GCGCAAAAAT CGGGTACACT CTATCCGTCT TTGTCTGGAG TATCGGGGCC ATGCTTCACG CTGTAGCCAG CAGTACGTTT GGTTTCGGCG TTTTCAGAGC CCTGCTGGGG CTGGGCGAAG GAGGAAATTT TCCGGCCTCT ATTAAAACGG TTACCGAATG GTTTCCGCAG AAAGACCGGG CGTTTGCTAC AGGTATTTTT AACTCAGGAA CCAACATCGG CGCCGTTGTT GCCCCGCTCA TGGTTCCCTG GATTCTGGGG CAGTATGGTT GGCAAGCGGC TTTTCTGGCT ACGGGAGCCA TTGGTTTTAT CTGGCTGATC TTCTGGTGGA TGTATTATGA AAAACCCAGC CTTCACAAAA AAATCTCGCC CGAAGAACTG GATTACGTTA GCGAAGCCGT CCCAACGAAT GTCGCTGAGC CTGCGCTGAA GTGGCTCGAC TTGCTGAACC GTCGGCAGAC CTGGGCTTTC ATCCTGGGAA AACTTCTAAC CGATCCGGTT TGGTGGTTTT TCCTGTTCTG GTTGCCTTCC TTTTTGGCGT CTACCTTCCA GATCAATCTA ACCAAACCCA GCTTACCCCT CATCCTGATT TATTCGTCTG CCACCATTGG TAGCGTGGGG GGTGGTTATA TCTCCGGTTA TTTTCTGGGG AAAGGCTGGT CGGTCAACTG GGCACGCAAA GCGTCGATGC TGGTCTTTGC GTTGTGCATT GTTCCTATTA TGGCTATTCA GTTTGCCTCT GAACTCTGGC AGGTAATTGC GTTACTGGGG CTGGCCGTGG CAGCACACCA GGCCTGGAGC GCCAATCTGT TTACCCTTGT GTCGGACCTG TTTCCGCGAA AAGCCGTAAG TTCAGTTGTC GGGATAGGTG GCATGGCTGG CTCCATTGGT GGTTTACTGT TTCCGCTACT GGTCGGTTCG CTGCTGGATT CCTACAAGGC AGCGGGCAGT ATCGCAACCG GCTACAATAT TCTTTTTGTA CTGTGTGGTA GCGCTTACCT CATCGCTTTG CTAAGTATTC ATTTACTGGT TCCGGCCATG AAACCAGTAT CGATTAATTT AGGCGACCCA AAACGTACTC CCGAAAAATA G
|
Protein sequence | MPKFPTSYRW QMTALLFVAT TINYLDRQVI SLLKPTLEKV FVWTETDYSH VVMAFQGAYA LSFIGFGWAI DRIGAKIGYT LSVFVWSIGA MLHAVASSTF GFGVFRALLG LGEGGNFPAS IKTVTEWFPQ KDRAFATGIF NSGTNIGAVV APLMVPWILG QYGWQAAFLA TGAIGFIWLI FWWMYYEKPS LHKKISPEEL DYVSEAVPTN VAEPALKWLD LLNRRQTWAF ILGKLLTDPV WWFFLFWLPS FLASTFQINL TKPSLPLILI YSSATIGSVG GGYISGYFLG KGWSVNWARK ASMLVFALCI VPIMAIQFAS ELWQVIALLG LAVAAHQAWS ANLFTLVSDL FPRKAVSSVV GIGGMAGSIG GLLFPLLVGS LLDSYKAAGS IATGYNILFV LCGSAYLIAL LSIHLLVPAM KPVSINLGDP KRTPEK
|
| |