Gene Slin_5742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5742 
Symbol 
ID8729517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6986198 
End bp6986632 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content51% 
IMG OID 
ProductCytosine deaminase 
Protein accessionYP_003390506 
Protein GI284040576 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAAT TTATGCAGGA GGCCATCAAT CAGGCCCGCA AGAGTTTGAG CGAAGGGGGA 
ATTCCTATTG GGTCGTCCCT GGTTAAAAAT GGTGAACTGG TAGCGTCGGG ACACAACAAG
CGGGTGCAGG AAAATAACCC GATTCTGCAC GGTGAGATGG ATTGCCTGAA CAATGCCGGG
CGGGTAGGTT CATTCCGCAA TACGGTTATT TACTCGACCC TGATGCCCTG CTACATGTGT
GCCGGAACCA TCGTACAGTT CAAAATACCC AAAGTGATTG TGGGTGAGTC ACGTACGTTT
TTGGGGGCGC GGGAATTTAT GGAGCAGCAT GGCGTTGAAG TCATTGACCT CGACCTGCCC
GAGTGCGTCG ACATGATGAA CCAGTTTATC GCCGAGAAAC CAACCCTCTG GAATGAGGAT
ATCGGCGAAC TGTAA
 
Protein sequence
MDEFMQEAIN QARKSLSEGG IPIGSSLVKN GELVASGHNK RVQENNPILH GEMDCLNNAG 
RVGSFRNTVI YSTLMPCYMC AGTIVQFKIP KVIVGESRTF LGAREFMEQH GVEVIDLDLP
ECVDMMNQFI AEKPTLWNED IGEL