Gene Slin_5739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5739 
Symbol 
ID8729514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6982331 
End bp6984538 
Gene Length2208 bp 
Protein Length735 aa 
Translation table11 
GC content55% 
IMG OID 
Productpeptidase S9 prolyl oligopeptidase active site domain protein 
Protein accessionYP_003390503 
Protein GI284040573 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCAA CGTTTTTACT GCTTATTACC CTGGTGGCGC AGACGGTCTG TGCCCAGCAA 
AAATCAAAAG TTACGGTTAC CGACCTGACC CGTATCAAAC AGGTTGGCGG CATTTCGTTG
TCGCCCGATG GGCAGCGAGC TGTTTACGCC CTCGCCACCA TTGAACCGAA CCCGGACAAT
AAAGAAGAAT ACGAGTATAA AACTCATGTG TATTTAACGG GTCTGAAGCC CGGCGATAGC
AAAGCCCTGA CGCGTGGACC TGAGTCGGCC CGGCAGGCCG TCTGGTCGCC CGATGGCCAG
CGGATTGCCT TCGTGCGGAC CGTAAAAGGG AAGGGTCAGA TTTTTATCAT GCCGCTGGAC
GGGGGAGAAG CCTGGCAACT TACGAATACG ACCTACGGAG CCTCTACGCC CCTCTGGTCG
CCGGATGGAA CCCGGATTTC GTTTACATCG GGCATCACAA TGGCACAGAT GTTAACCGAT
TCGCTGGTGA ACCCCGGCAA AAACACGCCC CTCTGGTCGC TGGAGAAGCC GGGCTTTGCA
AACAATAATT TTATTAAAAG CGATAAGAAA GTAAAGCCTA ATCCGGATGG GTCGCTGGCC
GAGGTACGGG CGTATCTGGA AAAAGATGTT GACGACAAGA AAGCGAAAGT GTTCAACCGG
CTCAATTTTC AGGGCGAAGC GACCACAGAA CCCGAGCTAT CGTTTACGCA CATGTACGTG
GTTGATGTGA AGGAAGGAGC TACGCCCAAA GCCCTGACGC GCGGTTTTTA TTCGTATCAG
GGTGGTAACT GGCTGCCAAA CGGACAGGGG CTACTGGTTG TAACTGACCG CGATTCGCTC
AAACACCCCG ACCGGGAGCA GGATAACAGG ATCGTCTATA TTCCGGCCGA TGGCTCAGGT
ACGCAGAAGG CTGTTCTATC AGAAGCCGGT AAAAGCTATC GCTCCCCCAG CGTATCGCCC
GATGGAAAGC AACTGGTATT CATGGTGTCC CCATCGGAAG GTGTTAATTT CCCCCAGCTT
GGTCTGGCAA CGCTCAATGG TACTTCGGTA TCGGGTGTTG AGCTCGTCAC CTTCGACCGG
GCACCTAGTA GCATGGCTTG GACAACCGCA CCGATTTCGG CAAAAGGCAA GAAAGGAACC
GCCGGTTATG TCATTTATTT CAATGCGTCG GCAAACGGCG GTTCGCCCCT GTACCGGCTT
GACCCCGCTA CGAAGCAGGT CACACAGCTA ACCGATTTCA CGGCTGGCGT CACCAGCTTC
GACGTGAGCG GTAACCGCGT GGTGCTCGCA AAAACAGAAG TAGCAAACCC GTCGGAGCTG
TACCTGACCG ATGCAGCCGC CAAAACACAG ACCAAACTCA GCAATTATAA CGACTGGGTG
GCGCAACGGC AGTTGAGTAC GCCGGAAAAA CGCACGTACA AAAATTCGCT CGGCCAAACG
GTCGATTACT GGATCATGAA GCCGTCGTTC TTCGAGGGCA ACAAAAAGTA CCCGCTGCTA
CTGAATATGC ACGGCGGCCC AACGGCCATG TGGGGACCGG GTGAGCCGTC CATGTGGCAT
GAGTTTCAGT ATATGTGTTC GCAGGGGTAT GGCGTGGTGT ATGCCAATCC GCGCGGATCG
GGAGGGTACG GTATCAATTT TCAGCGGGCC AACATCAAGG ATTGGGGCAC CGGCCCGGCC
GAAGATGTGC TGGCTGCCGT TACCGATGCC GCTAAAGAAA GTTGGGTCGA TACCAGTCGG
CAGGTGATTA CAGGCGGTTC GTATGCCGGT TACCTGACAG CTTGGATTGT GGGCCACGAC
AATCGGTTCA AAGCCGCTTT TGCCCAGCGG GGGGTGTATG ATTTGACCAC CTTTTTGGGT
GAGGGTAATG CCTGGCGGTT GATTCCCAGC TACTTTGCTT ATCCGTGGTC GGCGGAGGCT
AAAGTGCTGG ATGCCAACTC GCCTTATACC TTCGTCCAGA ATATCAAAAC GCCTTTGCTC
ATCAAGCATG GTGAGAACGA CCTCCGCACC GGGCCAATTC AGAGCGAGAT GATGTATAAA
AGTTTGAAGA TACTGGGTCG CCCGGTCGAG TACGTCCGTA TGCCAGGCGC TACGCACGAA
CTGAGCCGGT CGGGTAACGT TCGGCAACGG ATTGACCGAC TGCTGCGGAT TTACGAGTTC
TTCGAGCGGT ACGTAGGGGC TGATGCGCAG GTGGTTACCC AGAAATAA
 
Protein sequence
MRATFLLLIT LVAQTVCAQQ KSKVTVTDLT RIKQVGGISL SPDGQRAVYA LATIEPNPDN 
KEEYEYKTHV YLTGLKPGDS KALTRGPESA RQAVWSPDGQ RIAFVRTVKG KGQIFIMPLD
GGEAWQLTNT TYGASTPLWS PDGTRISFTS GITMAQMLTD SLVNPGKNTP LWSLEKPGFA
NNNFIKSDKK VKPNPDGSLA EVRAYLEKDV DDKKAKVFNR LNFQGEATTE PELSFTHMYV
VDVKEGATPK ALTRGFYSYQ GGNWLPNGQG LLVVTDRDSL KHPDREQDNR IVYIPADGSG
TQKAVLSEAG KSYRSPSVSP DGKQLVFMVS PSEGVNFPQL GLATLNGTSV SGVELVTFDR
APSSMAWTTA PISAKGKKGT AGYVIYFNAS ANGGSPLYRL DPATKQVTQL TDFTAGVTSF
DVSGNRVVLA KTEVANPSEL YLTDAAAKTQ TKLSNYNDWV AQRQLSTPEK RTYKNSLGQT
VDYWIMKPSF FEGNKKYPLL LNMHGGPTAM WGPGEPSMWH EFQYMCSQGY GVVYANPRGS
GGYGINFQRA NIKDWGTGPA EDVLAAVTDA AKESWVDTSR QVITGGSYAG YLTAWIVGHD
NRFKAAFAQR GVYDLTTFLG EGNAWRLIPS YFAYPWSAEA KVLDANSPYT FVQNIKTPLL
IKHGENDLRT GPIQSEMMYK SLKILGRPVE YVRMPGATHE LSRSGNVRQR IDRLLRIYEF
FERYVGADAQ VVTQK