Gene Slin_5738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5738 
Symbol 
ID8729513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6981675 
End bp6982196 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390502 
Protein GI284040572 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.545411 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAGT CCGACATTCC GGTGATGCCA AAGTTCTTCG ACCGGTATAT CAATCTGGCC 
GACAATGACT GGCTCCTCCT CGATGCCCTC ACCCAGGGCG CATCCTTCGA AAACCTAATC
CCTGCCGAAA CGCTCGAAAA ACTGGGCGAT CTCCGCTACG CCCCCGAAAA ATGGACGGTA
AAAGATATTC TACAGCACAT CATTGATACC GAACGTATCA TGAGCTACCG GGCCATGCGT
ATCGCCCGCA ATGACAAAAC CCCTTTACCC GGCTTCGATG AGGTGATGTT TGGTGAAAAT
GCCAACGGCA TTAACCGAAC CATACCAGAT TTGTACGAAG AATACAGCCT TGTAAGGCAG
TCCAACATCG CTATGTTCAA GAGCTTCGAC CACGACATGC TGCTGCGTTC CGGAACCTGT
TCTGATCAGC CTATATCGGC CATCGCCCTG GGTTTCGTGC TGGTCGGACA TGCCACCCAC
CACGTGAATG TCATCAAAGA GCGGTATCTG CCCCTCCTGT AA
 
Protein sequence
MTKSDIPVMP KFFDRYINLA DNDWLLLDAL TQGASFENLI PAETLEKLGD LRYAPEKWTV 
KDILQHIIDT ERIMSYRAMR IARNDKTPLP GFDEVMFGEN ANGINRTIPD LYEEYSLVRQ
SNIAMFKSFD HDMLLRSGTC SDQPISAIAL GFVLVGHATH HVNVIKERYL PLL