Gene Slin_5734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5734 
Symbol 
ID8729509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6976526 
End bp6977860 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content52% 
IMG OID 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_003390498 
Protein GI284040568 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.59304 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCAAT TCGATAAACT TTCGCTCAAT ATACCGGATA CAACTAAACC ACGAGTCGTC 
ATTATCGGCG GTGGATTTGG TGGTATGAAT CTAGCCAAAA GCCTCCGCAA TACGGATGTG
CAGGTAGTGC TGCTGGATAA GCAGAATTAC AATGGTTTCT GGCCGTTACT GTATCAGGTA
GCCACCGCCG GTCTGGAGCC TGATGCCATT GCCGAGCCGT TTCGGAAGAT GTTCGATGGC
TTCGAAGATT TCCATTACCG GATGGTTCGT GTCAACAAAA TAGATCCGGC CACCAAAACG
GTAACCACGC TGATCGGCGA TTTACACTAC GATTATCTGG TCATCGCCAG CGGTACAAAG
TCTAACTTTT TTGGCAATAA GGACATCCAG AAATATTCAT TCCCGCTTAA AACCGTACCG
GAAGCCCTCA ACGTACGGAG TCAGTTTTTA CAGTGCTTCG AGCAGGCCAG CGTTACTACC
GATCCCGCCG AACGGGAAAG TCTGCTGACG TTCGTTATCG CCGGGGCCGG TCCAACGGGT
GTCGAAATGG CCGGTTCGCT GGCCGAGATG CGCAAACACG TACTGCCCAG CGATTATCCG
GGTCTGGATT TCAGCCAGAT GAAGATTTAT ATTGTGGAAG GGGTGGGTAA AGTGCTGCCG
CCCATGTCGG AGGAGGCTGG TAAAAAAGCC CAACGCTACC TCGAAGACCT CGGCGTTATT
ATCAAACTGA ACACGCTGGT GGAGGGCTAC GATGGCGAAA CGGTCACGTT TAAAGGTGGT
GAACAGATAC GAACCCAAAC CTTAGTGTGG GGTGCTGGCG TAACCGGTGC ACTGATCGAT
GGTATTCCGG CCGAATCCGT TGAGCGGGGA CGTATCTTAG TCGACCCCAT TAACCGGGTG
CAGGGCCTGA CCAATGTGTT TGCCATCGGT GATATTGCTC TGATGAAACT GGAGGATTAC
CCGAAAGGGC ATCCGGGTGT GGCGCAGCCC GCCATTCAGC AGGGTGAGCA TCTGGCCAAA
AATATTCGTC GCTTATTAAA GAACGAACCA ACCGAGCCGT TCAAGTATTT CGATAAAGGA
TCGCTGGCCA TTGTAGGCCG TAGCCGCGCC GTGGCCGATC TGCCGGGCAA TATTCACCTG
GGGGGCTTTG TCGCCTGGAT GGCCTGGCTG TTCGTCCACA TCTGGTATCT GGTTGGCTTC
CGCAGCAAGC TGGTCGTGTT TAGCAACTGG GTGTACCGGC TGTTCACCTA CGAGCGCGGC
ACCCGAATTA TTATTCGTCC GTTTATACGC AAGGATGATA AAGTAGGGCA GGAGATTATG
GCCCAGAGTG AGTAA
 
Protein sequence
MLQFDKLSLN IPDTTKPRVV IIGGGFGGMN LAKSLRNTDV QVVLLDKQNY NGFWPLLYQV 
ATAGLEPDAI AEPFRKMFDG FEDFHYRMVR VNKIDPATKT VTTLIGDLHY DYLVIASGTK
SNFFGNKDIQ KYSFPLKTVP EALNVRSQFL QCFEQASVTT DPAERESLLT FVIAGAGPTG
VEMAGSLAEM RKHVLPSDYP GLDFSQMKIY IVEGVGKVLP PMSEEAGKKA QRYLEDLGVI
IKLNTLVEGY DGETVTFKGG EQIRTQTLVW GAGVTGALID GIPAESVERG RILVDPINRV
QGLTNVFAIG DIALMKLEDY PKGHPGVAQP AIQQGEHLAK NIRRLLKNEP TEPFKYFDKG
SLAIVGRSRA VADLPGNIHL GGFVAWMAWL FVHIWYLVGF RSKLVVFSNW VYRLFTYERG
TRIIIRPFIR KDDKVGQEIM AQSE