| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5733 |
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| Symbol | |
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| ID | 8729508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 6973898 |
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| End bp | 6976312 |
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| Gene Length | 2415 bp |
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| Protein Length | 804 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003390497 |
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| Protein GI | 284040567 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0884503 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATTC GAGTACAAGC ACTCTTCTTC TCTCTTCTGT TTATCAGTAA CTTACATGCC
CAGCCAACCC AGCGTGTTAC GGTCAGCGGT TACGTACGCG AAACCGGAAG TCTGGAAGCT
TTAATTGGAG TAAACGTCTA TCTACCCGGA ACCACAACCG GTACAACGAC CAACACCTAC
GGTTTTTATT CACTTACTCT GCCCGCTCAG GATACCCTGC GTCTGGCCTA TTCTTTCGTT
GGATACGAAA CCCATGAACG GGCCATTGCT TTTCGCAAAA ACCAGACGGT CAATGTACTT
CTATCGCCCG GCCAGGCCCT GACGGAGGTC GATGTAAAAG CGGGGCGTCT GACCGAAAAA
GTGAGCGAAA GCGCTCAGAT GAGTACAATT GATGTGCCCG TAAGCCAGAT CAAAAAAATA
CCGGCCTTTC TGGGCGAGAA AGACGTGCTG AAAGTGCTGC AACTGATGCC CGGTGTGCAA
AAGGGCTCGG AAGGGCAGAC GGGTATTTAC GTGCGCGGGG GCGGCCCAGA CCAGAACCTC
ATTATTCTGG ACGATGCCGT CGTATACAAC GCCAATCACC TGTTCGGCTT CTTCTCAGTC
TTCAACGGCG ACGCCATAAA AAGTGTCGAG TTGATAAAAG GTGGGTTCCC GGCGCGATAC
GGCGGGCGAC TTTCATCGGT GATCGACCTG AACATGAAAG ACGGTAACCG CGAGAAATTG
CATGGCGAAG GCGGCATTGG CCTGATTGCC TCCCGGCTCA TGCTCGAAGG ACCACTGACG
AAAAACAAGA AAGCCTCTTT TCTGGTCTCC GGCCGACGAA CCTACCTGGA TGTGGTGGCG
GCTCCGCTGG TACGGCAGCA ATCGGGAGGT ACGCTAACGG CTGGTTACTA TTTTTACGAC
CTTAATGCCA AAGCCAATTA CGACTTCAGC CCAACCAATA AGCTTTACCT GAGCGGGTAC
TTTGGCCGGG ATAGGTTTTA TGCAAACGAT AACTCGTTGA ACGCCAACAC GGGTTTAAGC
TGGGGCAATG CTACTGGCAC GCTCCGCTGG AATCACCTCT TCAACCAGAA GCTTTTCTCG
AACCTGTCCC TGATTTTCAG CGATTACAAG TTTCAGATTT CATCGGTCGA GAAAGGGACG
CAGGATGAGC AGACTTATTC GCTTTACTAT GATTCAGGCA TTCGGGACGT ATCGCTAAAG
TACGATATGG ATTATTACCC CACGCCCCGG CACTCGGTCC GGATGGGCAT ACAGGGTACC
TACCATCGCT TTACGCCCAG CGCCGTTGTC CTGCAAAACG CCCTGATCAA TCAGTCTGTC
AACAATGTCG ATAACATTAA TGTGCTTGAA TCGGGCCTTT ATGCCGAGGA TACGTGGCGA
CCATCGAGCC GGTGGCGCGT GAACGGCGGG CTCCGGCTGA GTTATTTTCA GCAGAAAGAC
GCAGGCTATT TCCGGCCTGA GCCACGACTA TCGGCGGCTT TCACCCTCAA ACCCGATTTG
TCGGTCAAGG CTTCGTACGC CATGATGAAT CAGTATGTAC ACCTGCTATC GAACACGGGC
ATCGGCCTGC CAACCGATTT ATGGGTACCC ACCACAGACC GGGTTAAACC GCAGCAATCG
CAGCAGGTGG CAGCTGGTAT CGCCAAAGAC TTTTCAACCG GAAGTGCGTT CGTCAGGGGC
CTTACGCTAA CCGTGGAAGG CTATTACAAA ACGATGAGTA ACATTATCAA CTACAAGGAG
GGGGCCAGCT TTTTGCTGAT CAACGACCCA ACGGCGGCCA ACAGCGTGCG CTGGGAAGAT
AATGTAACCG CAGGCCGGGG CTGGTCGTAC GGAGCCGAGT TCCTGTTACA GAAAAAAGCC
GGACGCTTCT CGGGCTGGGC GGGCTATACC CTTTCCTGGA CACAGTGGCA ATTTGCCGAA
CTCAACAGTG GGCAACCCTA CTATCCACGC TACGACCGCC GACATGATAT TTCGCTGGTG
GGTATTTATG AACTGAATAA AAAGATTACC CTATCGGCCG TTTGGGTTTA CGGGACAGGT
AATGCCCTGA CCGTTCCGGT TAGTCGCTTT GAAACCTACC GCCCCAGCAA TACACTCGTT
TATGGGAGCA CGCCCGCTAT AATTCAGCAG TTTTTTCAAA ATGCCCGGAC GAATGACGAT
TACGGGATGC AAAAGAACAG TTTCCGGGCC GAAGCGTATC ATCGCTTTGA TTTCGGGATT
CAGTTTCACA AGAAGAAAAA GCACCATGAA CGAACTTGGG AATTCAGCGC CTACAACCTA
TACAACCGCC GAAATCCCTT TTTTTACCGG CTCGAATCGG TAGCTGCAAC AGCAACGGAG
CCTGCCCGAA CGGCCTTGTT CCGTTACTCG GTATTTCCAA TCGTACCGGC GGTTAGCTAT
ACTATCAAAT TCTGA
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| Protein sequence | MRIRVQALFF SLLFISNLHA QPTQRVTVSG YVRETGSLEA LIGVNVYLPG TTTGTTTNTY
GFYSLTLPAQ DTLRLAYSFV GYETHERAIA FRKNQTVNVL LSPGQALTEV DVKAGRLTEK
VSESAQMSTI DVPVSQIKKI PAFLGEKDVL KVLQLMPGVQ KGSEGQTGIY VRGGGPDQNL
IILDDAVVYN ANHLFGFFSV FNGDAIKSVE LIKGGFPARY GGRLSSVIDL NMKDGNREKL
HGEGGIGLIA SRLMLEGPLT KNKKASFLVS GRRTYLDVVA APLVRQQSGG TLTAGYYFYD
LNAKANYDFS PTNKLYLSGY FGRDRFYAND NSLNANTGLS WGNATGTLRW NHLFNQKLFS
NLSLIFSDYK FQISSVEKGT QDEQTYSLYY DSGIRDVSLK YDMDYYPTPR HSVRMGIQGT
YHRFTPSAVV LQNALINQSV NNVDNINVLE SGLYAEDTWR PSSRWRVNGG LRLSYFQQKD
AGYFRPEPRL SAAFTLKPDL SVKASYAMMN QYVHLLSNTG IGLPTDLWVP TTDRVKPQQS
QQVAAGIAKD FSTGSAFVRG LTLTVEGYYK TMSNIINYKE GASFLLINDP TAANSVRWED
NVTAGRGWSY GAEFLLQKKA GRFSGWAGYT LSWTQWQFAE LNSGQPYYPR YDRRHDISLV
GIYELNKKIT LSAVWVYGTG NALTVPVSRF ETYRPSNTLV YGSTPAIIQQ FFQNARTNDD
YGMQKNSFRA EAYHRFDFGI QFHKKKKHHE RTWEFSAYNL YNRRNPFFYR LESVAATATE
PARTALFRYS VFPIVPAVSY TIKF
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