Gene Slin_5732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5732 
Symbol 
ID8729507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6972933 
End bp6973898 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390496 
Protein GI284040566 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.193719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.109044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACCA ATCGACTTAC CCTGACCGAC TTTTCTACGC TGATTACGTT CCTGAGCGTG 
ATCGGGTTGT TTATAGGATG CAGCAGCTTA CGGAATGAAG TTGACCCGAG CCTGTTAGGC
TTTGCCTCGT CCAAACTGGT TGTCACCGGC TATTTGTCGC CACAGGATAC GACTTTGGCC
GTGAAAGTGA CGCGCTCGAA AACCGTTGTT GGCAACGATA GCCTCGACAC GGGTAGTAAC
GTTACGGATG CAACTGTCAC TCTAACCGAA GGCAGTCGAT CTGTTATCCT GCGATATAAC
AGGCTCAACT CACCAGTCGA TTCGTTAAAG CAGCCTTATT ATAGCGCCAG TGCCCGAATG
CTGCCAATTA TAACCGGGCG CACTTACACG CTTACCGTAA CAACGCCGAA CGGAGAACGG
GTCAGAAGTA CCTGTACCGT ACCTAATCGG GTTCGTCCAA CGGCGGTTAC GTTCGATTCG
ACAACGGAGA ATCAGGGACG CTCGCTGCTT CGACGGTACT ATGTGCTGGT TCGCTGGCAA
GACCCGCCGG GTGAGGCTAA TTACTATCAG GTTACGGGCT ATTTTCAGTA TATGACAAAG
CCCGTTCAGG GTGTTAGTCT ATTGGGCACC ACCCAGCTAT CCAATTCCGA CGACAACCGT
GGCTTATTTT CTGATGCGGG TCTGGATGGT ACGCAAATGA TTTCCGGAAA GGCTTATATG
TTATCCACTC CGTTCACCAG TGATCAGGTG ACAAATTTTT ACGGGAAGTA CCGCGATGCG
AAAGTTACCG TCAATCTAAT GAGCGTCGAC CGGGCGTATT ACCAGTTTCA GGAAGCAGTC
ATCCGCCAAC GGCGCGTCCG GAACAACCCC TTCGCCGAAC CCGTCCTGAT TCCGAGCAAT
ATTGAGGGTG GACTGGGTTG TTTTGCCGGC TATAATAACG CTACCCTGAC ACTGAAGTTA
AAGTGA
 
Protein sequence
MRTNRLTLTD FSTLITFLSV IGLFIGCSSL RNEVDPSLLG FASSKLVVTG YLSPQDTTLA 
VKVTRSKTVV GNDSLDTGSN VTDATVTLTE GSRSVILRYN RLNSPVDSLK QPYYSASARM
LPIITGRTYT LTVTTPNGER VRSTCTVPNR VRPTAVTFDS TTENQGRSLL RRYYVLVRWQ
DPPGEANYYQ VTGYFQYMTK PVQGVSLLGT TQLSNSDDNR GLFSDAGLDG TQMISGKAYM
LSTPFTSDQV TNFYGKYRDA KVTVNLMSVD RAYYQFQEAV IRQRRVRNNP FAEPVLIPSN
IEGGLGCFAG YNNATLTLKL K