Gene Slin_5727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5727 
Symbol 
ID8729502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6966579 
End bp6967700 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content54% 
IMG OID 
Product6-phosphogluconolactonase 
Protein accessionYP_003390491 
Protein GI284040561 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0610515 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAT TACTCGTTGG CATCCTGGTT AGTATAGGTC TCACAGCACA GGCTCAATCG 
CCAAAAGAGA TCATGTATGT TGGTACGTAC TCCGTTCGGG GTAGCGAAGG CATCTACGTA
TTTGAGTTCG ACCGGAAGGC TGGTACCATG CAGCCCATTC AGTCGATCTC GAACGGCAAG
AGCCCGTCTT TTCTGGCCAT TCATCCCTCC GGGAAATACC TCTACTCGGT CAATGAAGGA
GCCGATAAAC TTGGGGGCGT CAGCGCATAT ACTATTGACA AGGCAACGGG TAAACTGACG
TACATGAACG CACAATCGAC ACTCGGTGCC GGTCCCTGCC ACGTCAGCGT CGACCAGACG
GGCAAGACGG CCTTTGTTTC CAACTACGGT GGCGGCAGTC TGGCGGTGCT TCCGATAAAC
GCCGACGGGT CACTGGCCGC TCCTTCCGAC AGCGTTCAGG ATGTAGGTAC CGGCCCCAAT
ACGGCACGGC AGGATAAAGC CCATATGCAC TCGGCCACGC TGGCCCCCGA CAACCGGTTT
GTATATGTCG CCGACCTGAC CACCGACAAA GTCAATATTT TCGATGTCGA TACAAAGTCA
AGCACCGTAA AGCCAGCCTC CACGCCTTAT GCAAGCGTAA AGCCTGGTTC AGGACCGCGG
CATTTTACTT TTCACCCCAA TGGCAAATAC GCTTACCTGG TCGAAGAACT GACCTCTACG
GTGGCCGTAT TTTCCCGAAA CCCAAAAACC GGAGCGTTGA CTCTACTCGA CGATAACATC
AAAACCCTGC CCGATGGCTT CTCGGGGCAG AATACCAGCG CCGATATTCA CATCGACCCG
TCGGGCAAGT TTCTGTATTT CTCTAATCGG GGGGCCAACA CGCTGGCTAT CTTTTCCATC
GGCAACGACG GACGGCTTAC CAAAGTGGGC GACCAACCGA CTGAAGGCAA AACACCACGC
AACTTCCTGA TCGACCCCAA AGGAGACTTC GTCTTTGTCG GGCATCAGGA TACGGACAAC
ATCACCATTT TTAAGCGGGA CAAAAAAACG GGGTTGCTGA CCTACACGGG CCAGTCGGTG
AAGGTCCCGG CGGCCGTCTG CATTTTGATG GCTACCCGAT AA
 
Protein sequence
MNKLLVGILV SIGLTAQAQS PKEIMYVGTY SVRGSEGIYV FEFDRKAGTM QPIQSISNGK 
SPSFLAIHPS GKYLYSVNEG ADKLGGVSAY TIDKATGKLT YMNAQSTLGA GPCHVSVDQT
GKTAFVSNYG GGSLAVLPIN ADGSLAAPSD SVQDVGTGPN TARQDKAHMH SATLAPDNRF
VYVADLTTDK VNIFDVDTKS STVKPASTPY ASVKPGSGPR HFTFHPNGKY AYLVEELTST
VAVFSRNPKT GALTLLDDNI KTLPDGFSGQ NTSADIHIDP SGKFLYFSNR GANTLAIFSI
GNDGRLTKVG DQPTEGKTPR NFLIDPKGDF VFVGHQDTDN ITIFKRDKKT GLLTYTGQSV
KVPAAVCILM ATR