Gene Slin_5721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5721 
Symbol 
ID8729496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6959061 
End bp6959402 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content44% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390485 
Protein GI284040555 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00294987 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAACAGAC AGCTTCCACT CCGGTTTTTG CTCCTTGTCC AGACCATTGC GCTATTGGCA 
TACTCCTACA TAGCTTTTCA GAATGAAGGC GCAAACCTCC TTCAACTCTT CTTCTCAAAC
ATTACATCAC TAACCTGGAA TGGCCAGTTC AATTTGGATT TCAGTTGCTA CCTGACACTT
TCGGGGGTAT GGATTATGTG GCGGAATAAG TTTGCACCCG CAGCTATAGT GCTTGGATTA
TCAGCCATGA TTATAGGCAT TATGGCATTT GCTCCGTACG TCCTGTATTT GTTGACCAAA
GAGAATGGCG ACTTAAAAAA GGTGCTGATT GGAGACAGAT AA
 
Protein sequence
MNRQLPLRFL LLVQTIALLA YSYIAFQNEG ANLLQLFFSN ITSLTWNGQF NLDFSCYLTL 
SGVWIMWRNK FAPAAIVLGL SAMIIGIMAF APYVLYLLTK ENGDLKKVLI GDR