Gene Slin_5709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5709 
Symbol 
ID8729484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6944028 
End bp6946847 
Gene Length2820 bp 
Protein Length939 aa 
Translation table11 
GC content32% 
IMG OID 
ProductMolecular chaperone HSP90 family-like protein 
Protein accessionYP_003390473 
Protein GI284040543 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.147781 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTATA TAGTTATACC TGAGAAGTTA GAGGGAATTC TTAAAAAAGA TCCTTTTTTA 
CATAGTATTG TTGAGCAGAC AGCTGCATCA TTTAGTAAGA TACTGTATGA AAGTAAATTA
TTCTTCTTTG AGGAATACAC AGATCATGGT AGTGATCATA TTCAAAAAGT TTTAAGGGCA
GCAGAAGATA TAATCACACC AGAAACACTC GAGTTGCTGA GTTCAAAGGA TGTTGCTGTA
CTTGTTCTAT CTGTATTTTT ACATGATATT GGAATGCATA CAGAGTTTTC TACATTCAAA
TCTTTAGTGG AAGAGAAAGC ATATGACGAT TGCAGAGAAA CTATTCTTGA TCAAAAATGC
TGGAATGAAA TTTGGGAAGA TTATTTAGAT GAGGCAAAGA AATTTAGTGG TAAACAACGT
TTTGCTATAT TTGGAGATGA GACTGTAGAG TATAGGCGTC CGAGTCTTTT TAGAAAAGAT
GATTTATCCG GATCTGATAG AAAATTAATA GGTGAATTTA TTAGGAGGTA TCACCCTAGA
TTAGCATATG AAATAGGTTT TAAAGGTATT ATTGGCTCTA ACGGACAAGT AATTGAATTT
GCGGTCGGTT TGCCAAAGAT GCTAAGACAA TTATCTGCAA TAGTTGCAAG AAGTCATGGG
ATAAATATTC GTGATACATA CCAATATTTG GAATCGATTG GAGATAAAGC GTGGAAGAGA
CCAGATCAAG TAAATGTAAT ATTTTTAATG GTTGTAATTA GAATAGCTGA TTATTTTCAA
TTTGGATCTA ATAGGGTAAA CCCTGAAACC TTAAAGATTA AAACCTTTTC TAGCCCCATA
TCTATATTTG AACATAAAAA GCATTTAGCG ATTGATTTTA TTCAACCTGA CGATGTTGAT
CAGGAAACAC TTTTTGTTAA AAGTAATCCT ACGTCAGGTC TTATGTATAT TAGATTGAAA
AGTCTTTTCA AGGATATACA ACATGAATTA GATTTATCAT GGGCAGTACT GGGTGAAACT
TATGGAAACT TTCAATTAGA TAGACAACTT AAAATTCGTT ATAGAAGAAT TGATTCAAAT
TTGAATAGTG TAAATTTATT GAGAAGTATA TCTTATATAC CAGAGGAAAT TAAATTTAAA
TCTGATGCTG ATCTACCTAA ATTATTAGTG GCACCGTTAT ATGGCAATGA TCCATCATAT
GGAGTAAGAG AAATGACTCA GAATGCAGTT GATGCATGCA AAGAGCGTGA GTTTGAGGAA
AAGGAAATCA ATACGATGTA TTTTCCGAAA ATTCAGATGG GTATAATAAC AGAAAACCAA
AATACTTTTT TTATCGTAAG AGATAATGGT AAGGGGATGA ACCTATTAGA ATTGAAGAAC
TATTTTCTCA AGGCAGGTGC ATCTTTTCGA AAAAGTCTTG ATTGGCAATT AAAATATACC
AATGACGAAG GAGAACCGAA GATACAAAGA AATGGTAAGT TTGGTGTAGG GGTACTTTCT
ACTTTCCTGT TAGGAAACGA GATTTACGTA GAAACAAGGA GTATGCATGA TGGAGTTGGA
TACTCTTTTA CTGCTAAGAT AGATAGTGAA CAGATAGAAA TAACAAAAAG AGATGATCTA
GAAGTAGGTA CTTTTATTAA AATATTAATA AATAATGTTA CTGTCGATAG TCTAAATGCA
CCAAAATCAA AAACAAAGAA ATGGTATCAA TGGTATGTTT TAAAAAGCCC TCTTATTGAA
TACATTGGTA TACCTGTGCT CGACTCAAAA TCAGTGGCCC CATACCTTCC TAATTATGAA
GATAGCCTTC CGAATGTTTG GCATTCATTT AAACCTCGTG GATTCAATAA AGTGATGTGG
ACATACGATG AGAACTATAG AAGTAAGGCT TTTAGCTGCA ATGGAATCTT AATTCCTTCC
AATATAGATC TCCCGACAAA ATACCCTAAT AAGGCTAGTT ACGATGGTTA TTCTAAAATA
ATAAACAGAA TGCCAATTAT ATCTATTTTT GATTACAAGG GTACTCTTCC TTTAACGTTA
AACAGGAATT CTATTGATGG TCAACTGCCA TTCTCAATAG ATTTAGTAAG AGAGATATAT
AAAGACTTTA TTGCTAGTTT ATTATGCTTC AAGCCGAATT CTAATTTTAT AGATAATGAA
ATGCGTATAG TAAATGAGAG CTTTATACAT CCATCATTTG CTGATCCTAA TACTAAATTA
CAGTCTCATT TAGATAATAT TATATATCTT AGCGAAGGAT TTATGTATGA TTATGGCTAT
TTTAGAAAAT ATATAAAGAA GAAGTTAATT ACTCTTTTCT CCAAAAAAGA TGAACTGGTG
ATTGAGTTAG CAGATTCATA CAAAAATGGT TATGCTTTTA AATTTGAAGT AGAAAATAAA
GTACGGCTTT CTTATAACTG GAATTTGTCT GATCCAGCAT ACAACGGCGG AGGTAGAGTA
ACTATGCCTA AATCTAGTTA TTTGGAATTG TTTGATCCTA ATAAGAATAG AGTTAGAAAA
GGTCTAAAGC AAGAACATAT AGTAGAGATA GAAACTGATG GATGGGTTAC ATATTCAACA
CTCTATAAAG AAAAGCTTAA TGAAGAACTT ATATCTAATA TTTTAATTAA TAAGTCTATA
ATTTCTATTA AAGAAACTTC TGTAAACGAA AGACAGTCAC ACGATATGTT AGATAATTTG
ATAAAGCATT ACTTAAAAGA CGATTTAATC ATTCCATATG ACATGGCTCA ACGTAGAAAA
AAATTCTACA CTGCCTATGA AGAATTGGCA GAATACTGCG CCAAATACAA AAATGAGTGA
 
Protein sequence
MNYIVIPEKL EGILKKDPFL HSIVEQTAAS FSKILYESKL FFFEEYTDHG SDHIQKVLRA 
AEDIITPETL ELLSSKDVAV LVLSVFLHDI GMHTEFSTFK SLVEEKAYDD CRETILDQKC
WNEIWEDYLD EAKKFSGKQR FAIFGDETVE YRRPSLFRKD DLSGSDRKLI GEFIRRYHPR
LAYEIGFKGI IGSNGQVIEF AVGLPKMLRQ LSAIVARSHG INIRDTYQYL ESIGDKAWKR
PDQVNVIFLM VVIRIADYFQ FGSNRVNPET LKIKTFSSPI SIFEHKKHLA IDFIQPDDVD
QETLFVKSNP TSGLMYIRLK SLFKDIQHEL DLSWAVLGET YGNFQLDRQL KIRYRRIDSN
LNSVNLLRSI SYIPEEIKFK SDADLPKLLV APLYGNDPSY GVREMTQNAV DACKEREFEE
KEINTMYFPK IQMGIITENQ NTFFIVRDNG KGMNLLELKN YFLKAGASFR KSLDWQLKYT
NDEGEPKIQR NGKFGVGVLS TFLLGNEIYV ETRSMHDGVG YSFTAKIDSE QIEITKRDDL
EVGTFIKILI NNVTVDSLNA PKSKTKKWYQ WYVLKSPLIE YIGIPVLDSK SVAPYLPNYE
DSLPNVWHSF KPRGFNKVMW TYDENYRSKA FSCNGILIPS NIDLPTKYPN KASYDGYSKI
INRMPIISIF DYKGTLPLTL NRNSIDGQLP FSIDLVREIY KDFIASLLCF KPNSNFIDNE
MRIVNESFIH PSFADPNTKL QSHLDNIIYL SEGFMYDYGY FRKYIKKKLI TLFSKKDELV
IELADSYKNG YAFKFEVENK VRLSYNWNLS DPAYNGGGRV TMPKSSYLEL FDPNKNRVRK
GLKQEHIVEI ETDGWVTYST LYKEKLNEEL ISNILINKSI ISIKETSVNE RQSHDMLDNL
IKHYLKDDLI IPYDMAQRRK KFYTAYEELA EYCAKYKNE