Gene Slin_5705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5705 
Symbol 
ID8729480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6940806 
End bp6941384 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content46% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390469 
Protein GI284040539 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.275995 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTCCG CTCTATCAAC TTTCTTTTAT CGGATATCAT CCTGGAAAAC GTTACTGCTG 
GGAATCGTTC TTTATGTGCC TTTCCCAGCG TACGTTCTCA GGAACCTCGA AGCCCGTATG
AATGTACTGG CAGGACAAGC CGTTGGGCCT ATCGACCTGC TGGTTGGCTA TGACCCCCTC
CGAATTCAAC AAATGGTTGA AGCCTATGGA CCTGAAGGCA GGGCGGTTTA TGCACAGGGG
GAACTTACCA CCGACATCGC TTATCCGTTC ATCTACACGT TCCTGTTTTG TGTTATCCTC
ACATTACTGT TCAGACACAG AAAATACAAT TCGTTTCGGC TGGTCAATGT ATTGCCCGTG
GGCATACTCG TTTTCGATCT GCTGGAAAAT TGTTGTATCG TCTATTTACT CAAGACATTT
CCCAATTCGC CGTACGTTGT CTCGTCTCTC TGTTCTGTTT TAACTAACCT GAAATGGATT
GTCACGATGA TTGTGTTAGG TTTAGTAGTT TATGGCTTGG TAAAGCTGGC CATACGAAGC
GGCCAATCCA GAACCAGACA CGGCCAAATG ACGCATTAG
 
Protein sequence
MLSALSTFFY RISSWKTLLL GIVLYVPFPA YVLRNLEARM NVLAGQAVGP IDLLVGYDPL 
RIQQMVEAYG PEGRAVYAQG ELTTDIAYPF IYTFLFCVIL TLLFRHRKYN SFRLVNVLPV
GILVFDLLEN CCIVYLLKTF PNSPYVVSSL CSVLTNLKWI VTMIVLGLVV YGLVKLAIRS
GQSRTRHGQM TH