| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5704 |
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| Symbol | |
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| ID | 8729479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 6938635 |
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| End bp | 6940701 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | oligopeptide transporter, OPT family |
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| Protein accession | YP_003390468 |
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| Protein GI | 284040538 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.525123 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTAA CCCCACCCGC CCATAAACCC TTTGTTCCGG CAACGGAATC GCCCGCCGAG
TTTACGCTGA AAGCAGTTAT CACCGGCGCG GTATTTGGCG TCCTCTTTGG CGCAGCAACG
GTTTACCTCT CGCTGAAAGC CGGGCTATCT GTGTCGGCTT CCATTCCCAT CGCGGTGCTG
GCCATTTCCC TCGGCCGTCG ATTTCTGAAT ACGACAATTC TTGAGAATAA TATCATCCAG
ACCACTGGTT CAGCGGGAGA GAGTATTGCA TCCGGAGTAG TGTTTACCAT GCCGGGGTTC
CTCTTCTTGA CCAACGGTTC CGGGGCCGAT TTTTTTAATT ACTGGACGAT TCTTACGCTG
GCTATTCTGG GTGGACTGAT CGGTACGTTG ATGATGATTC CGCTGCGTCG GTCGCTTATT
GTGCAGGAAC ACGGCACCCT GCCGTATCCG GAGGGGACCG CCTGTGCGTC TGTCCTGATT
GCCGGGGAGA AAGGCGGTGA CTTTGCCAAA ACGGCCTACC AGGGGCTGGG GGCAGCACTT
ATCTATGCCT TTCTCCAGAA AGTGCTGCAC ATCATTGCCG AAGTGCCGGT ATGGGCCACG
AAGCAGGCCA ATCGGTATTT CCCATCGGCG CAGGTAGCGG GCGAAATAAC GCCCGAGTAT
CTGGGTGTAG GTTATATTAT TGGTTTCCGG ATTTCGGCGG TGCTGGTCGG TGGCGGTATT
CTGGCCTGGC TGGGGCTTAT TCCGCTCCTG GCTTCTGTTG TGCCGGGCGA CACGATAGCG
TTGCAATTAC AGAAACTGGG CTATCTCGAT AACCTCCAAA CCGTCGGTGG CCCGGGTGGC
TGGAATCCGG CTACGCACAC GTTCTCAGAC ACGGCAGCGG CCATCTATCG GGCATATATC
CGGCAGATTG GGGCTGGTGC CGTAACCGCC GGTGGGTTCA TGACGCTTAT AAAAACCATT
CCAACCATTG TCTCTTCGTT TAAGCAGAGT TTCAGCAAAA CCTCGATCAA CGCCATCGAA
GCCGAAAATG CGATGAGCGG ACACAGCGGC ATTCCCCGAA CAGAACAGGA CTTGAGCGTG
CGGATCGTTA TTATTGGTAG CATTGTGCTG GCAGCTCTGA TGGTTATATT ACCCCAAATC
CCCGGCGATT CTATATTGAC TAAATTACTG ATCGCTGTAC TTGTCATTGT ATTCGGCTTC
TTTTTCGTTA CTGTGGCCAG CCGAATTGTG GGGCTGATCG GGTCAAGCTC GTCACCCGTT
TCTGGAATGA CCATTGCCAC GATCATGGGC ACGTCGCTGG TGTTCATTGG CTTCGGTCTG
ACCGGGAAAC TGTATGAACC CGCCGTTTTG GTTGTGGGAA GCATGATTTG TGTGGCGGCT
GCCAATGCCG GTGCAACCTC GCAGGATCTC AAAACCGGAT ACATCGTCGG CGCGACGCCG
AAATACCAAC AAATGGCCTT GTTTATCGGC GTCATAGTAT CGTCGCTGGT CGTGGGAGCA
ACGGTCAAGA TTCTGGACAC CCCCACGCCT GATCTGCTGG CGCAGGGTAT TACGCACGCC
ATTGGCTCCG ATAAGTTCCC GGCTCCGCAG GGTACACTGA TGGCCACCCT CATCAAAGGT
TTATTGTCAT TCAACCTCGA CTGGCAGTTT GTGCTCGTAG GTGCCTTTAT TGCTTTTGTG
TTCGAGTTAG TGGGCGTGAG TGCGCTGGCG TTTGCGGTGG GCTTGTATTT ACCGCTGTCG
ACTACACTAC CCATTTTTGC CGGTGGTCTG GTCAAAGCCA TCGTCGACGC CAACAAGAAA
CGGAAAGGTA TTGTGGAGGA AGATGCCGAT CTGGGTAAGG GAAATCTGTT TGCAACGGGT
CTGGTTGCCG GAGGAGCCTT AGCAGGGGTA GCCGTAGCCT TGCTATCCGT CAACGCATCC
ATCTACAATG GGCTGGCCTC GCTTACGCTG GAGCCTTTGC TGGGTAGCGC ATTGGGAGAA
GGCGGCTACA TGCTGCTGGG TGCGTTGTTG TTCGTTGGTC TGGCAATTGT ACTATGGCGC
GTAGGTGAAC AGAAACAGGA AGGCTGA
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| Protein sequence | MALTPPAHKP FVPATESPAE FTLKAVITGA VFGVLFGAAT VYLSLKAGLS VSASIPIAVL
AISLGRRFLN TTILENNIIQ TTGSAGESIA SGVVFTMPGF LFLTNGSGAD FFNYWTILTL
AILGGLIGTL MMIPLRRSLI VQEHGTLPYP EGTACASVLI AGEKGGDFAK TAYQGLGAAL
IYAFLQKVLH IIAEVPVWAT KQANRYFPSA QVAGEITPEY LGVGYIIGFR ISAVLVGGGI
LAWLGLIPLL ASVVPGDTIA LQLQKLGYLD NLQTVGGPGG WNPATHTFSD TAAAIYRAYI
RQIGAGAVTA GGFMTLIKTI PTIVSSFKQS FSKTSINAIE AENAMSGHSG IPRTEQDLSV
RIVIIGSIVL AALMVILPQI PGDSILTKLL IAVLVIVFGF FFVTVASRIV GLIGSSSSPV
SGMTIATIMG TSLVFIGFGL TGKLYEPAVL VVGSMICVAA ANAGATSQDL KTGYIVGATP
KYQQMALFIG VIVSSLVVGA TVKILDTPTP DLLAQGITHA IGSDKFPAPQ GTLMATLIKG
LLSFNLDWQF VLVGAFIAFV FELVGVSALA FAVGLYLPLS TTLPIFAGGL VKAIVDANKK
RKGIVEEDAD LGKGNLFATG LVAGGALAGV AVALLSVNAS IYNGLASLTL EPLLGSALGE
GGYMLLGALL FVGLAIVLWR VGEQKQEG
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