Gene Slin_5700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5700 
Symbol 
ID8729475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6935746 
End bp6936537 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content54% 
IMG OID 
ProductCutC family protein 
Protein accessionYP_003390464 
Protein GI284040534 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.815133 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGCGTA AATTTTTATA CATACCCATC AACTGTACGA CTATGCTACT TGAAGTATGC 
GCTTACTCCC TCGATTCATG CCTTACAGCC CAACGGGCAG GTGCCGGACG AATAGAATTG
TGTGGCGGTA TGGCCGAGGG AGGAACCACA CCGAGTGCAG GCTTGATCCA GCTCGTCCGA
CAGCAAATTC ACATACCCAT TTACGTAATG ATTCGGCCAC GCGGGGGCGA TTTTCTATAT
TCTGACACGG AACTGGCGGT GATGCGGGCG GATATTAGTC TGGCAAAAGC ACTGGGCGCG
GATGGACTGG TTCTGGGTAT TTTGCAGGCC GACGGCACCG TCGATGAAGC AACTACCCGT
GCGCTGGTAG AACTGGCGCA CCCGCTACCC GTTACGTTTC ATCGGGCTTT CGACATGACC
CGCGATCCGT TCGAAGCCCT GGAAGCCGTT ATTCGTACCG GTGCCGTTCG GATTCTTACC
TCCGGCCAGC ACCAAACCGC CGAAGCGGGC TTATCCGTTA TTCGGCAACT GGCAAAGCAG
TCTGCCGGAC GCATTGAAGT CATGGCGGGT GCTGGTGTAA ATGCCTCAAA CGCGGCTTTA
TTTATTGACG CAGGGGCAGA TGCCCTTCAT TCCAGCGGTA GCCACACAGA AAACAGCCGG
ATGGAATTTC GTCAGCCCGC CGTTTCCATG GCCTCAGCCG TACCCGATGA ATACGAACAT
ATCGAAGCAA ACGAAGAAAA AGTAAGGGCG CTGGTCGCAA TTACAAGACA ATCGCCCGGT
TCCCCGAAAT AA
 
Protein sequence
MTRKFLYIPI NCTTMLLEVC AYSLDSCLTA QRAGAGRIEL CGGMAEGGTT PSAGLIQLVR 
QQIHIPIYVM IRPRGGDFLY SDTELAVMRA DISLAKALGA DGLVLGILQA DGTVDEATTR
ALVELAHPLP VTFHRAFDMT RDPFEALEAV IRTGAVRILT SGQHQTAEAG LSVIRQLAKQ
SAGRIEVMAG AGVNASNAAL FIDAGADALH SSGSHTENSR MEFRQPAVSM ASAVPDEYEH
IEANEEKVRA LVAITRQSPG SPK