Gene Slin_5693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5693 
Symbol 
ID8729468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6929277 
End bp6930473 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content51% 
IMG OID 
Productprotein of unknown function UPF0075 
Protein accessionYP_003390457 
Protein GI284040527 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.729289 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGTC AAATTCAGCA CCTTTATAAC ATCGCTCAAC AGCCAGTCCG TCGAATTATT 
GGTCTGATGT CCGGAACATC GCTCGATGGG CTTGATGTGG CTCTTTGTCA TATTTCTGGT
AGTGGACCCG GTACGGAGGT TGTCCTGCAT CGTTTTACTA CGGTACCTTA CGATGAAGAA
CTGAAAGCCG AGATTCGGAC CATCTTTGCT AAAGACAAAA TCGAATTCGA GAAGCTTTGT
TTGTTAAATC CATACATCGG TCGGCTACAT GGTCAACTCA TTCTCGATTG TCTGAAAAAC
TGGGGTATCA GTACTGATGA GGTAGATATA ATTGCCAGTC ACGGGCAAAC CGTCTATCAC
GCTCCGAAAA GTCAGCACCG GCACGATAAG TTCCCAAACG CCACCCTCCA GATTGGCGAT
GGCGATCACA TTGCAGCCGT CACCGGAGTT ACTACGCTGA GCGATTTCCG ACAGAAGCAC
GTGGCACACG GGGGCGAGGG AGCACCATTG GCCGTTTACG GGGATTATTT CATGTTCTCG
AAAGCGGGCG AGAATCGTCT TTTGCTGAAT ATGGGCGGTA TCGCCAACTT CACGTACCTG
CCCGCTGACG AAGATGCCAG CAGTGTGTTT ACGACCGATA CGGGGCCGGG AAACACACTG
CTGGATGCCT ACGCCCGTAT ATTTCTGAAC AAGCCTTACG ACGAAGATGG CAAACTGGCC
GCTCAGGGAA CGATTAATAA CGATCTTCTA CAAGCCTTAA AAATCAACCC GTTTTTCGAC
GCAGCTTTTC CTAAAACAAC CGGCCCTGAA GTCTTCAAGG CTGCTTACGT GGAAGAGGCA
CAGGCCCGCA GTCAAACAAC CGGCTTATCC GCCGAAGATT TAATGGCTAC CCTTGTGCAA
TTCAGTGCCG ATACGATTGT GGATGCCATC CAGCGGGTTA TGCACGAAGG CGAAACCTAC
CGGATCTACA TGAGCGGGGG CGGGGCGCAT AACCCCATCC TGACAACGGC TCTTAAGAAA
GGGCTGCCCA ATTGTTCGTT TGGGCTGACC AATGAGCTTA ACATCAACGG CGATGCGAAA
GAAGCGGTCT TATTTGCCGT GTTAGCCAAC GAATGCCTGG CGGGTGGCAA TACGTCGTTT
GGCAATCGGC AGGGCGTACC GACGGTTACG ATGGGGAAGG TTAGCTTTCC GAAGTAG
 
Protein sequence
MNRQIQHLYN IAQQPVRRII GLMSGTSLDG LDVALCHISG SGPGTEVVLH RFTTVPYDEE 
LKAEIRTIFA KDKIEFEKLC LLNPYIGRLH GQLILDCLKN WGISTDEVDI IASHGQTVYH
APKSQHRHDK FPNATLQIGD GDHIAAVTGV TTLSDFRQKH VAHGGEGAPL AVYGDYFMFS
KAGENRLLLN MGGIANFTYL PADEDASSVF TTDTGPGNTL LDAYARIFLN KPYDEDGKLA
AQGTINNDLL QALKINPFFD AAFPKTTGPE VFKAAYVEEA QARSQTTGLS AEDLMATLVQ
FSADTIVDAI QRVMHEGETY RIYMSGGGAH NPILTTALKK GLPNCSFGLT NELNINGDAK
EAVLFAVLAN ECLAGGNTSF GNRQGVPTVT MGKVSFPK