Gene Slin_5684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5684 
Symbol 
ID8729459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6920188 
End bp6921018 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content48% 
IMG OID 
Productepimerase 
Protein accessionYP_003390448 
Protein GI284040518 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.947481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGATA AAACAATTAC CATTCTTGGC TGTGGCTGGC TTGGATTACC ACTCGGTAGG 
GCTCTTGCGA CAGGAGGTTT CCAGGTGAAA GGAAGTACCA CAACACCAGA AAAGCTTACC
AGACTTGAAC AGGCGTCTAT AGAAGGACAC CTGCTTCGAT TGAATCCTGA ACCGGAAGGT
GAGTTGAGTA TACTTCTGCA AGCTGATGTA CTAGTAATCG ATATTCCGCC CAGAGCCGGT
AAACAAGGCG ATGACTTCCA TCCTGCTCAG ATTAACCATC TGGCTAATGC CATTCGGCAA
TCATCGATAA AGCATGTTAT ATATGTAAGC TCTACATCGG TCTATCCCGA ATTGAACCGG
GTAGCTGTGG AGGAGGATGT TCAAGAGCCG GAGCAATCGG CTTCTCCGGC TTTAGTACAG
GCAGAGCAAT ATGTGCAACG TTTAGCACCC GACCGATTGG TTACCATCGT TCGGTGCGGT
GGATTGATGG GTTACGATCG TATACCCGGC AAATACGTTG CAGGACGCAC TGTTGATAGT
GGAGCGGTAC CTGTTAACTA TCTGCACCGA AATGATGCTG TAGGCCTTTT AAAAGCGATT
ATAACGCAAT CCCTGACTGG AGTTTATAAT GCCGTTTCTC CCGAACACCC AACGCGGGAG
GCTATCTACC GCAAAAGCTG TGCAGATTTT GGTTACGCAC TGCCAACCTT CATTGATCCG
GTAAGCCCGG TACCATACAA AGTGATTTCA CCAGAAAAAA TCATTTCCGA CACGGGCTAC
CTGTTCCAGT ATCCAAACCC ATTGAGTTTT TTATATAGCT CAGGAGCGTA G
 
Protein sequence
MPDKTITILG CGWLGLPLGR ALATGGFQVK GSTTTPEKLT RLEQASIEGH LLRLNPEPEG 
ELSILLQADV LVIDIPPRAG KQGDDFHPAQ INHLANAIRQ SSIKHVIYVS STSVYPELNR
VAVEEDVQEP EQSASPALVQ AEQYVQRLAP DRLVTIVRCG GLMGYDRIPG KYVAGRTVDS
GAVPVNYLHR NDAVGLLKAI ITQSLTGVYN AVSPEHPTRE AIYRKSCADF GYALPTFIDP
VSPVPYKVIS PEKIISDTGY LFQYPNPLSF LYSSGA