| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5681 |
|---|
| Symbol | |
|---|
| ID | 8729456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 6917671 |
|---|
| End bp | 6918270 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_003390445 |
|---|
| Protein GI | 284040515 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.232887 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCGAC TTATACCGTT TTTTACAACA GAAGCTAAGC TGATTGGAGC GCTGAAACGG
GGCGAAAGCC GCGCGCACAA GGTCATCTAT GAACGGTATG CCGGTAAAAT GCTAGCTGTT
TGTACGCGTT ATTGTGCAAA CAGAGCTGAT GCAGAAGAAG TGATGCTGGA CGGCTTTATG
AAAGTTTTTG AGAAAATAGA GCAGTTTAGA GAGGATGGTA GTTTTGAAGG GTGGATCAGA
CGTATTATGG TGACAGAATC GTTGATGTTC CTGCGGAAAG CAAAACAATG GCGACAGGAA
GTATCCCTTG ACGAAGTGAT CGTTGAGCCG GACTACGAGT GGGCCGATAC CGCTGTGAAT
GAAAACGATT TGTTACGGAT GGTGAATCAA ATGCCCGATG GCTATCGTAC TGTGTTTAAC
CTTTATGCAA TTGAGGGGTA CTCACACGCT GAAATAGCAG AAATGCTTGG CATTTCGGAG
GGGACGTCAA AGTCTCAACT GAGTCGTGCG CGGCTGTTAC TGCAAACGAA TTTAAAGAAA
TTGGAACAGG AAACTCGGTC TGAACCCTAT GAAAAAGCAT ACAGAAAAGC CGCCAGTTGA
|
|---|
| Protein sequence | MLRLIPFFTT EAKLIGALKR GESRAHKVIY ERYAGKMLAV CTRYCANRAD AEEVMLDGFM
KVFEKIEQFR EDGSFEGWIR RIMVTESLMF LRKAKQWRQE VSLDEVIVEP DYEWADTAVN
ENDLLRMVNQ MPDGYRTVFN LYAIEGYSHA EIAEMLGISE GTSKSQLSRA RLLLQTNLKK
LEQETRSEPY EKAYRKAAS
|
|---|
| |