Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5658 |
Symbol | |
ID | 8729432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 6892925 |
End bp | 6895351 |
Gene Length | 2427 bp |
Protein Length | 808 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | peptidase S45 penicillin amidase |
Protein accession | YP_003390422 |
Protein GI | 284040492 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.674957 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAATACA CAAAAGCAAT CCTTGTTTCT TTAGGTACAA TCTCACTCAT TTGGGCCCTT AACCGATCGT GGGGCAGTAT TCCAGCTTTT GCACCACTCC TTAGTCCGTT CGTTGGTTTC TGGCAAAATG CCGAGTCCGT CAACAATGCC GATGAAGAAA TTACGCTGGA AGGCACCAAG GCGCCCGTTA CGGTTATTTT TGACGATCTG GCTATTCCGC ACGTCTTTGC ACAAAACGAT GCAGATGCCT ACTTCACCCA GGGCTATCTG ACCGCCCGCG ACCGCCTTTG GCAAATGGAA TTTCAGACGC ACGCAGCCGC CGGACGGGTT TCTGAACTGG TGGGCGATAA AGCACTTGAA CTGGACCGAT ATAACCGACG GCTGGGCATG GGCTTCGGTG CCGAAAAAGC GGTTAAAGAA ATGTTGGCAG ACCCTCGCAC ACGCGAAGCG ATTGAGTCGT ATACAGCTGG TATAAATGCT TATATCAACC AGCTTTCGCC ATCTGGTTAT CCACTCGAAT ACAAGCTGTT AGGCTACGCC CCCGAGCCCT GGCAACCCAT TAAATGCGCC TATTTCCTGA AATATATGTC GGGGGTGTTA GCGCTCGGTG CCGATGACCT GAATATGAGC AATGTGCTGA AAAAATACGG CACCGTTGTT ACGAACGACC TTTTTCCAGA TTACCCCTTC CGGGAAGACC CCATCATTCC GGCAGGCACG AAGTGGGATT TTACTCCGGT GAAGATACCG GCCGTACCCG CTAATTCACA GACCGATACA AAGCCGCTGG CCATGAACTG GCCCGAACAT GACCCGGCTA TTGGGAGTAA CAACTGGGCT GTTGGCCCGC AGAAATCAGC GACAGGGTAC CCAATTCTGG CTAATGACCC CCACCTCACC CTAAGTTTGC CGTCGATCTG GTACCAGATT CAGCTGGTTA CGCCCACCAT GAACGTGTAC GGAGCCTCCA TGCCCGGATC GCCGGGGGTT ATTATTGGCT TCAACAAGCA GATTGCCTGG GGTGTAACCA ACGTGGGTGC TGATGTTCTG GATTTCTATC AGATTCGGTT CAAAGATGCT TCCCGCCGTG AATACTGGCA CGACAATAAG TGGAAGCCGG TAACCCGTCG GTTAGAAGTG ATCAAAGTGA AAGGGCAGGC CGACGTAATT GATACCGTTC TGTACACCCA TCATGGCCCA ATTATGTATG AAGTGGGTCA GAAGCCGTTT GCCAGCAATG TGCCGGTGGG GTATGCCGCC CGTTGGATTG CTCATGAAGC CTCCAACGAC TTTCTGACCT ATTATTTGCT CGACCGTGCC AAAAACCACG ATGATTATCG AAAAGCCTTA AGCTCCTACA GCGCTCCGGC TCAGAATTTC GTGTTTGCCG ATATCGCCAA AGATATTGCC ATCTCGCCAA ATGGCCGGTT TCCGCTGAAG TGGAAAGATC AGGGCAAGTT TTTGCTGGAT GGCACGAACC CCGCCCACGA CTGGCAGGGC TGGATTCCGG CCGCACAGAA CCCGCACGTC AAAAATCCGT CCAGAGGGTT TGTTAGTTCA GCTAACCAGT CGTCTACTGA CCCAACTTAT CCGTATTACA TCAACTGGCA ATTTGGCTCT TATGAGCGTG GTGCCCGGAT CAATCAGCGG CTGACGGCTA TGAAAAACGC CACGGCTGAT AGCTTGCGGG TGTTGCAAAA TGACAATCGA AACGTAAGGG CTACCGATGC CCTTCCGGTG TTTCTGCCTT ACATACAGGA GAAGGGCTTA TCCGGCGCGC AAGCCAAAGC ACTGGCCATC ATTAAAAAGT GGCAATATAA TAATGATGTC GCGGAGATAG GCCCAACCAT TTTTACGGAG TGGATGCGTC AGTGTATGGA TGGTGTCTGG AAAGATGATT TTCCGGGTAA TGACAGTACC ACGCTCCGGT ACCCAAGTTT CGACCGGATG CTTCAACTGG CCGAGAAAGA CCCGGCATCG CACTGGTTTG ACGATATAAC AACGCCCGCC AAAGAAACAA TTGTACTTGT ACTAACCAAA AGCTTTCAGT CGGCAGTCGA TTCGCTTACG CATCGGCACG GGCCTCTGGG AGAATCCTGG CAATGGGGCA AGCATAAGGC TACCCGTATC GGGCACCTGG CCCGGCTAGA TGCGCTAAGT GCCTTGAATG TGCAGATTGG AGGAGGGGCT GGCATTGTCA ACGCCACCAC CGAACGGACC GGGCCATCGT GGCGGATGGT TGTTGCTCTC GGACCGACCC CCAAAGCGTA TGGCGTCTAT CCCGGCGGAC AATCGGGTAA TCCGGGCAGT CCTTATTACC TGAACATGCT CGAAACCTGG CGAACGGGCC AACTGAATGA ATTGCTTTTC CTGCAAACAG CACAGGACAA AAATCCAAGA CTAAAACGGA AACTAACCTT GAAATAA
|
Protein sequence | MQYTKAILVS LGTISLIWAL NRSWGSIPAF APLLSPFVGF WQNAESVNNA DEEITLEGTK APVTVIFDDL AIPHVFAQND ADAYFTQGYL TARDRLWQME FQTHAAAGRV SELVGDKALE LDRYNRRLGM GFGAEKAVKE MLADPRTREA IESYTAGINA YINQLSPSGY PLEYKLLGYA PEPWQPIKCA YFLKYMSGVL ALGADDLNMS NVLKKYGTVV TNDLFPDYPF REDPIIPAGT KWDFTPVKIP AVPANSQTDT KPLAMNWPEH DPAIGSNNWA VGPQKSATGY PILANDPHLT LSLPSIWYQI QLVTPTMNVY GASMPGSPGV IIGFNKQIAW GVTNVGADVL DFYQIRFKDA SRREYWHDNK WKPVTRRLEV IKVKGQADVI DTVLYTHHGP IMYEVGQKPF ASNVPVGYAA RWIAHEASND FLTYYLLDRA KNHDDYRKAL SSYSAPAQNF VFADIAKDIA ISPNGRFPLK WKDQGKFLLD GTNPAHDWQG WIPAAQNPHV KNPSRGFVSS ANQSSTDPTY PYYINWQFGS YERGARINQR LTAMKNATAD SLRVLQNDNR NVRATDALPV FLPYIQEKGL SGAQAKALAI IKKWQYNNDV AEIGPTIFTE WMRQCMDGVW KDDFPGNDST TLRYPSFDRM LQLAEKDPAS HWFDDITTPA KETIVLVLTK SFQSAVDSLT HRHGPLGESW QWGKHKATRI GHLARLDALS ALNVQIGGGA GIVNATTERT GPSWRMVVAL GPTPKAYGVY PGGQSGNPGS PYYLNMLETW RTGQLNELLF LQTAQDKNPR LKRKLTLK
|
| |