Gene Slin_5658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5658 
Symbol 
ID8729432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6892925 
End bp6895351 
Gene Length2427 bp 
Protein Length808 aa 
Translation table11 
GC content52% 
IMG OID 
Productpeptidase S45 penicillin amidase 
Protein accessionYP_003390422 
Protein GI284040492 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.674957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATACA CAAAAGCAAT CCTTGTTTCT TTAGGTACAA TCTCACTCAT TTGGGCCCTT 
AACCGATCGT GGGGCAGTAT TCCAGCTTTT GCACCACTCC TTAGTCCGTT CGTTGGTTTC
TGGCAAAATG CCGAGTCCGT CAACAATGCC GATGAAGAAA TTACGCTGGA AGGCACCAAG
GCGCCCGTTA CGGTTATTTT TGACGATCTG GCTATTCCGC ACGTCTTTGC ACAAAACGAT
GCAGATGCCT ACTTCACCCA GGGCTATCTG ACCGCCCGCG ACCGCCTTTG GCAAATGGAA
TTTCAGACGC ACGCAGCCGC CGGACGGGTT TCTGAACTGG TGGGCGATAA AGCACTTGAA
CTGGACCGAT ATAACCGACG GCTGGGCATG GGCTTCGGTG CCGAAAAAGC GGTTAAAGAA
ATGTTGGCAG ACCCTCGCAC ACGCGAAGCG ATTGAGTCGT ATACAGCTGG TATAAATGCT
TATATCAACC AGCTTTCGCC ATCTGGTTAT CCACTCGAAT ACAAGCTGTT AGGCTACGCC
CCCGAGCCCT GGCAACCCAT TAAATGCGCC TATTTCCTGA AATATATGTC GGGGGTGTTA
GCGCTCGGTG CCGATGACCT GAATATGAGC AATGTGCTGA AAAAATACGG CACCGTTGTT
ACGAACGACC TTTTTCCAGA TTACCCCTTC CGGGAAGACC CCATCATTCC GGCAGGCACG
AAGTGGGATT TTACTCCGGT GAAGATACCG GCCGTACCCG CTAATTCACA GACCGATACA
AAGCCGCTGG CCATGAACTG GCCCGAACAT GACCCGGCTA TTGGGAGTAA CAACTGGGCT
GTTGGCCCGC AGAAATCAGC GACAGGGTAC CCAATTCTGG CTAATGACCC CCACCTCACC
CTAAGTTTGC CGTCGATCTG GTACCAGATT CAGCTGGTTA CGCCCACCAT GAACGTGTAC
GGAGCCTCCA TGCCCGGATC GCCGGGGGTT ATTATTGGCT TCAACAAGCA GATTGCCTGG
GGTGTAACCA ACGTGGGTGC TGATGTTCTG GATTTCTATC AGATTCGGTT CAAAGATGCT
TCCCGCCGTG AATACTGGCA CGACAATAAG TGGAAGCCGG TAACCCGTCG GTTAGAAGTG
ATCAAAGTGA AAGGGCAGGC CGACGTAATT GATACCGTTC TGTACACCCA TCATGGCCCA
ATTATGTATG AAGTGGGTCA GAAGCCGTTT GCCAGCAATG TGCCGGTGGG GTATGCCGCC
CGTTGGATTG CTCATGAAGC CTCCAACGAC TTTCTGACCT ATTATTTGCT CGACCGTGCC
AAAAACCACG ATGATTATCG AAAAGCCTTA AGCTCCTACA GCGCTCCGGC TCAGAATTTC
GTGTTTGCCG ATATCGCCAA AGATATTGCC ATCTCGCCAA ATGGCCGGTT TCCGCTGAAG
TGGAAAGATC AGGGCAAGTT TTTGCTGGAT GGCACGAACC CCGCCCACGA CTGGCAGGGC
TGGATTCCGG CCGCACAGAA CCCGCACGTC AAAAATCCGT CCAGAGGGTT TGTTAGTTCA
GCTAACCAGT CGTCTACTGA CCCAACTTAT CCGTATTACA TCAACTGGCA ATTTGGCTCT
TATGAGCGTG GTGCCCGGAT CAATCAGCGG CTGACGGCTA TGAAAAACGC CACGGCTGAT
AGCTTGCGGG TGTTGCAAAA TGACAATCGA AACGTAAGGG CTACCGATGC CCTTCCGGTG
TTTCTGCCTT ACATACAGGA GAAGGGCTTA TCCGGCGCGC AAGCCAAAGC ACTGGCCATC
ATTAAAAAGT GGCAATATAA TAATGATGTC GCGGAGATAG GCCCAACCAT TTTTACGGAG
TGGATGCGTC AGTGTATGGA TGGTGTCTGG AAAGATGATT TTCCGGGTAA TGACAGTACC
ACGCTCCGGT ACCCAAGTTT CGACCGGATG CTTCAACTGG CCGAGAAAGA CCCGGCATCG
CACTGGTTTG ACGATATAAC AACGCCCGCC AAAGAAACAA TTGTACTTGT ACTAACCAAA
AGCTTTCAGT CGGCAGTCGA TTCGCTTACG CATCGGCACG GGCCTCTGGG AGAATCCTGG
CAATGGGGCA AGCATAAGGC TACCCGTATC GGGCACCTGG CCCGGCTAGA TGCGCTAAGT
GCCTTGAATG TGCAGATTGG AGGAGGGGCT GGCATTGTCA ACGCCACCAC CGAACGGACC
GGGCCATCGT GGCGGATGGT TGTTGCTCTC GGACCGACCC CCAAAGCGTA TGGCGTCTAT
CCCGGCGGAC AATCGGGTAA TCCGGGCAGT CCTTATTACC TGAACATGCT CGAAACCTGG
CGAACGGGCC AACTGAATGA ATTGCTTTTC CTGCAAACAG CACAGGACAA AAATCCAAGA
CTAAAACGGA AACTAACCTT GAAATAA
 
Protein sequence
MQYTKAILVS LGTISLIWAL NRSWGSIPAF APLLSPFVGF WQNAESVNNA DEEITLEGTK 
APVTVIFDDL AIPHVFAQND ADAYFTQGYL TARDRLWQME FQTHAAAGRV SELVGDKALE
LDRYNRRLGM GFGAEKAVKE MLADPRTREA IESYTAGINA YINQLSPSGY PLEYKLLGYA
PEPWQPIKCA YFLKYMSGVL ALGADDLNMS NVLKKYGTVV TNDLFPDYPF REDPIIPAGT
KWDFTPVKIP AVPANSQTDT KPLAMNWPEH DPAIGSNNWA VGPQKSATGY PILANDPHLT
LSLPSIWYQI QLVTPTMNVY GASMPGSPGV IIGFNKQIAW GVTNVGADVL DFYQIRFKDA
SRREYWHDNK WKPVTRRLEV IKVKGQADVI DTVLYTHHGP IMYEVGQKPF ASNVPVGYAA
RWIAHEASND FLTYYLLDRA KNHDDYRKAL SSYSAPAQNF VFADIAKDIA ISPNGRFPLK
WKDQGKFLLD GTNPAHDWQG WIPAAQNPHV KNPSRGFVSS ANQSSTDPTY PYYINWQFGS
YERGARINQR LTAMKNATAD SLRVLQNDNR NVRATDALPV FLPYIQEKGL SGAQAKALAI
IKKWQYNNDV AEIGPTIFTE WMRQCMDGVW KDDFPGNDST TLRYPSFDRM LQLAEKDPAS
HWFDDITTPA KETIVLVLTK SFQSAVDSLT HRHGPLGESW QWGKHKATRI GHLARLDALS
ALNVQIGGGA GIVNATTERT GPSWRMVVAL GPTPKAYGVY PGGQSGNPGS PYYLNMLETW
RTGQLNELLF LQTAQDKNPR LKRKLTLK