| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5653 |
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| Symbol | |
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| ID | 8729427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 6882325 |
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| End bp | 6885951 |
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| Gene Length | 3627 bp |
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| Protein Length | 1208 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | FG-GAP repeat protein |
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| Protein accession | YP_003390417 |
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| Protein GI | 284040487 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATTACT TACTCAGGCT GACCGGGTTT CTGGCACTCA TATTGGTCGG CTGTACGCAT
CCATCGTCAC GATTCGAACG ACTAACAACC CGTGAAACCG GCATCGACTT TGCCAATACC
ATTACAGAAA GCGATTCGCT GAATGTGCTC GAATTTGAAT ACCTCTACAA TGGGGGTGGC
GTTGGCGTTG GTGACTTCAA CGGTGATGGC CAGCAGGACG TATTCTTTGC CGGAAATCAG
GTTTCGAGCC GGATGTACCT CAACAAAGGC AATTTCAAAT TTGAAGACGT AACCGACTCA
GCAGGTGTCG GTACCAGGTA CTGGTGTACG GGCGTAGCCG TAGCTGATAT TAACCAGGAC
GGTCGGCAGG ACATTTACGT GTCGACCATC CACCCCAGCC GCGGCAAGGC CGTCCCCAAT
CTGCTCTTTC TCAATCAGGG TAACGATGCC AATGGCATTC CCCATTTTGT TGAATCGGCT
CAGGCGGCCG GGTTAGCCGA TTCAAGTTAC TCCACACAAG CCACCTTTCT CGACTTTGAC
CGCGACGGCG ACCTGGATTT GTTCCTGCTG ACAAACGCCC TCGAAAACTT CAACCGGAAC
AACGTTATTG GCCCCCGAAA CGACGGCTCC GCCCGAAGTG TGGATAAGCT GTATGAGAAT
GTAGGAGTTA GGAGTTGGGA GTTAGGAGCG AGGAGCCGTC CGGCCGCAAA AACGCTTTCG
CGTTCAGGTA CTGCTTCCGG CAGGCTCCTA ACCCCTCGCT CCCAACTCCT AACTCCTACA
TACAAAGATA TTTCCGCCCA GACGGGCCTT GTTCACGAAG GCTGGGGGCT GGGCGTACTT
GTGAACGACG TCAATCAGGA TGGGTGGCCG GATATTTATG TGGCCAATGA CTTTCAGTCC
AATGATGTAT GGCTCGTCAA CAATCAGGAT GGAACGTTTA GCAACCGCAT CGCCGAGACT
CTGAAACACC AGAGCCACAA CAGCATGGGC GTGGATATGG CCGACATAAA CAACGACGGC
CTGAATGACC TCGCCGTGGT GGATATGCTA CCGGACGACA ACCTCCGGCA GAAAACCATG
TTCTCTACCA TTCCCTACGA CCGCTTTCAG ATGGCTCGTC GGCTAGGCTA CCAACCGCAA
TACATTCGAA ATGTACTTCA GTTGAATAGA GGGTTTGGGG CAGCGAGCAA AGAGCATCCC
CTATCCCCTG TGCCTCACTT TTCAGACATT AGTTACCTGG CCGGAACAGC GGCAACCGAC
TGGAGCTGGA GTGCCCTTTT TTCCGATCTG GACAATGACG GTTTCTCAGA TTTACTGATT
ACAAATGGCT ACCGCAAAGA CATCACCGAT CTGGATTTCA CCAGCTATAA CCGGGACGAC
GGCAACTTCG GTACTGACAC CGACCGACGC GCTCAACTAC TGAAACGGAT TGTTGATCTG
GAGCCCGTTT ACAAACCTAA CTTCCTCTTC CACAATACCG GCGATCTCCA CTTTACGAAT
GTTGCTACCG ACTGGGGCCT GACCGAATCT TCTTTCACGA ACGGCACCGC CTATGCTGAC
TTCGACAACG ATGGCGATCT GGATCTGGTT ATGAATAATA TCAATGACCC GGCTTTCATC
TACCGAAATC GCACCGTCGA AAATGCAGAA TCCTCTCTCA AAACGCATTT TCTGCGCATA
ACCCTTGTGG GTAAGCCGGG TAATCGGGAA GGCATTGGCG CGAAAGTGGC CATCTGGTCA
AACGGACAGC TGCACTACAC CGAATATACC CGGCAACGAG GCTACCAGTC CACTATGGCA
TCGGGCATTC ATGTCGGACT GGGCTCGGCC AGACGCATCG ACTCATTAAA AATAGTCTGG
CCAACGGGCA ACGGGCAAAA GCTTACCAAT GTGGCAGTTG ATCAGTTGCT GACGCTGGAT
GAGCGAAAGG CGGGCCTTCA ACCCGAATCA TTTTTGACAT TACAACCTTC CGTTTCCCCT
TTACTAACAG AAATCACCTC GCCAAAGGGT CTTGACTATC AACATCAGGA AGACGACTTT
GTCGATTATA AAGCTCAGCA AACGCTTCTA CCGCACAAAC ATTCACAAAT TGGTCCAGGG
CTGGCGGCGG GGGATGTGGA CGGCAACGGG CTGGATGATA TTTACATTGC GGGCAGTGCC
TATAAAGGCG GTACGTTCTT TCTTCAGCAG AAGAACCAAC TACTGGCGTC CGCTTCGTTC
CGGCGGAAAG ACCAGCCGAC AAAAAAACCG GAAGAAACCG GCGTTCTTCT CTTCGATGCG
GATAACGACG GAGACCTTGA CCTCTACACC GTTCATGGAA GCACAGAATT TGGCCGGAAT
GAAACCGTCT GTCAGGATAG CCTATACCTG AATGATGGAA AAGGTAATTT CCGTGGGTCA
CCGAACGCTT TGCCCAACAC AATGTCCAGC GGCTCATGCG TTATTGCCAC CGACTTCGAC
CACGACGGCG ATTTAGATTT GTTCATTGGC GGGCGCATCA TCCCGCAGCG CTACCCGGAA
CCCGCCCGGA GTTATTTATT ACGCAATGAC AGCAAATCAG GCGCAGTCCG CTTCACCGAC
GTAACGGACC AACTGGCACC GGGCCTAAGC CGGGCGGGCC TGATTTGTTC GGCGCTCTGG
ACAGACGTTG ACAACGATAC CTGGCCCGAC CTAATGCTGG CCGGGGAGTT TATGCCCATT
ACCGTTTTCA GAAACCAGCA GGGTCGTGCT TTTTCAATCA TGCATACACC AGAACTAACG
AAGGCCGTTG GGTTCTGGAA CAGCCTCTCG GCGGGTGATT TCGACAATGA CGGCGACATG
GATTATGTAG CGGGAAATAG CGGCCTGAAC AGCCGCTTAC AGGCTTCGGC CAACCAACCC
GTATCTGTCT ACGCAGCAGA CTACGACAAA AACGGCACGC TGGACCCCAT AATCAGCTTT
TTCAACGGCG GCACGGAATA TCCCTTTCAC CCGCGCGATG TGCTGACGGA CCAGATTCCT
TCCTTTAAAA AGAAAATGAC GACCTATGCC GCTTATGGTA AAACAACGCT ATCGAACTTA
TTATCGACCG ACGAGCAAAA GCTTGCGGTG GTTAAACGAG TTACTTATTC GGCATCGGCT
TATATTGAAA ATAGGGCGGG TAGTTTTGTG ATTCATGCCT TACCCATTGA AGCTCAATTT
TCTCCCGTAT TCGGCAGTTC GATCATAGAC CTTAACCATG ACGGCAATCT GGACGTCCTA
CTGGCAGGCA ACGACTACTC GACCGAAGTC CTTTCGGGCT GGCAGGATGC CGGGCTTGGG
TTATGCCTAC TGGGCGATGG GCGGGGCAAC TTCAAACCAC TTTCACCGGC TCAGTCGGGC
TTTGTCGTTG ATGGAGATGC CAAAGCACTG GCCAGCCTAT TGGTAGCGAA TGGGCAATTG
TGGTACATAG CTACGCAAAA TAATGGCCCG CTGCGGGTGT TCACCGCAAC AGCGCCGGGT
GCACTCTATC AACGCCCTGA CCCCGCCAGC CAGAAACGGG CAACTGGCAC GACTCCTCGA
AAACAGGAAT TTAGCTATGG TAGCGGCTAC CTTTCCCAGT CGTCGTGGGT TGTGCCCGGG
ACGGTTTCAA AAAAAAATCA TAACTAA
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| Protein sequence | MYYLLRLTGF LALILVGCTH PSSRFERLTT RETGIDFANT ITESDSLNVL EFEYLYNGGG
VGVGDFNGDG QQDVFFAGNQ VSSRMYLNKG NFKFEDVTDS AGVGTRYWCT GVAVADINQD
GRQDIYVSTI HPSRGKAVPN LLFLNQGNDA NGIPHFVESA QAAGLADSSY STQATFLDFD
RDGDLDLFLL TNALENFNRN NVIGPRNDGS ARSVDKLYEN VGVRSWELGA RSRPAAKTLS
RSGTASGRLL TPRSQLLTPT YKDISAQTGL VHEGWGLGVL VNDVNQDGWP DIYVANDFQS
NDVWLVNNQD GTFSNRIAET LKHQSHNSMG VDMADINNDG LNDLAVVDML PDDNLRQKTM
FSTIPYDRFQ MARRLGYQPQ YIRNVLQLNR GFGAASKEHP LSPVPHFSDI SYLAGTAATD
WSWSALFSDL DNDGFSDLLI TNGYRKDITD LDFTSYNRDD GNFGTDTDRR AQLLKRIVDL
EPVYKPNFLF HNTGDLHFTN VATDWGLTES SFTNGTAYAD FDNDGDLDLV MNNINDPAFI
YRNRTVENAE SSLKTHFLRI TLVGKPGNRE GIGAKVAIWS NGQLHYTEYT RQRGYQSTMA
SGIHVGLGSA RRIDSLKIVW PTGNGQKLTN VAVDQLLTLD ERKAGLQPES FLTLQPSVSP
LLTEITSPKG LDYQHQEDDF VDYKAQQTLL PHKHSQIGPG LAAGDVDGNG LDDIYIAGSA
YKGGTFFLQQ KNQLLASASF RRKDQPTKKP EETGVLLFDA DNDGDLDLYT VHGSTEFGRN
ETVCQDSLYL NDGKGNFRGS PNALPNTMSS GSCVIATDFD HDGDLDLFIG GRIIPQRYPE
PARSYLLRND SKSGAVRFTD VTDQLAPGLS RAGLICSALW TDVDNDTWPD LMLAGEFMPI
TVFRNQQGRA FSIMHTPELT KAVGFWNSLS AGDFDNDGDM DYVAGNSGLN SRLQASANQP
VSVYAADYDK NGTLDPIISF FNGGTEYPFH PRDVLTDQIP SFKKKMTTYA AYGKTTLSNL
LSTDEQKLAV VKRVTYSASA YIENRAGSFV IHALPIEAQF SPVFGSSIID LNHDGNLDVL
LAGNDYSTEV LSGWQDAGLG LCLLGDGRGN FKPLSPAQSG FVVDGDAKAL ASLLVANGQL
WYIATQNNGP LRVFTATAPG ALYQRPDPAS QKRATGTTPR KQEFSYGSGY LSQSSWVVPG
TVSKKNHN
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