| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5650 |
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| Symbol | |
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| ID | 8729424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 6878084 |
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| End bp | 6879763 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | Choline dehydrogenase |
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| Protein accession | YP_003390414 |
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| Protein GI | 284040484 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTTG ATTACATCAT TGTTGGTGCT GGCTCGGCTG GCTGTGTGTT AGCAAATCGG
CTCTCGGCTG ATCCGGCAAA TTCAGTACTG CTGCTGGAAG CAGGTGGTCC TGATTCGAAA
ATGGAGATTC AGATTCCGGC CGCTTACACA AAACTACATG GATCAACCGT TGACTGGGGC
TTTTGGACAG AGCCGCAACA GGCACTCAAT GGACGGCGAA TGTATCAGCC CAGAGGAAAA
ACGCTGGGCG GCTGCTCATC GACCAATGCA ATGGCGTATG TGCGCGGCAA TCGGCTCGAT
TACGACGATT GGGCCTCATA TGGCAATTCG GGCTGGGGGT ACGACGATGT GTTGCCTTAT
TTCATCCGGT CAGAACATAA TGAACAGTTC GATCAGCTCG ATCCGCGTTA CCATGGCCAG
AATGGTCCGT TAAACGTCAC GTTTGCTACA CGCTTTCAAA CACCGCTTGC GGGAGCTTTC
GTCAATGCCT GCATACAATC CGGTATTCGA AAAAATGATG ATTATAACGG GGCCGAACAG
GAGGGCACGG GGTTATTTCA ATTCACGATC AGGGATGGCC GACGGCATAG TGCCGCAACG
GCCTTTCTAA AGCCCGCCCT CAACCGACCA AACCTCAAAG TCATTACCCA CGCCCACACG
AAGCAGATTC TGATTGAGCA GGACCGGGCA ACCGGTGTTG AGTTTATAAT CGGTAAAAAC
CAGACGCAAC AGGCAAAGGC GCGTAAGGAA GTAATCCTGT CGGCGGGGGC GTTCCAATCA
CCGCAGTTAC TAATGCTGTC GGGCGTTGGG CCTGCCGATA CGCTTCGGTC GGCGGGAGTT
CCGGTAAAGA AGGAGTTGCC TGGTGTGGGG CAGAATTTGC AGGATCATCT TTTTTCGGGG
GTTAGCAGCT TATGCTCGCA GCGGGGCATT TCGGCTAATT TTCACCTTAA ACCATTGAAC
CAGCTGAAAG GGCTGGCCCA GTTCTTCATC AGCAAAAAAG GGCCGATGAC CATAAGCCCG
CTCGAAGCCG TCGCCTTTTT ACAAACCGAT CAGCTTAGCC GTGCAGATGC CGATGCAGGC
CGTATCGACA TGCAGCTCCA CTTTGCCCCC GTTCACTTCG ATACGACGGA CAAGACAGAT
TTTTATGATC TAACAACCTA TCCCGTAACG GATGGTTATA CCGTTCTGCC AACCTTGCTT
AAGCCCAAAA GTCGGGGTTA TGTTGGACTG CGGTCTGGTA ATCCGCTCGA CGCTCCTGTC
ATTCAGCCAA ATTACCTGAC CGACGAGCAG GATCGACAGG TGTTGCTTAG CGGCCTTCGA
AAAACGATTG AGGTGATGCA CGCCGATGCG TTCGGTCCCT ACAGCCGTGG TATTAATGTA
CCGGCGGTCC ATGCATCGGA CGATGACCTT TGGCAACATG TACTGAGTGT TCTGGAAACA
GTTTACCATC CGGTCGGAAC CTGCAAAATG GGACCGACGT CCGATGAACT GGCCGTTGTC
GATGCGGACT TAAGGGTTCG GGGTATTGAG GGACTTCGGG TAGTAGATGC CTCCATTATG
CCGACAATTG TGTCGGGCAA TACCAACGCG CCAGTCATTA TGATTGCCGA AAAAGCCGCC
GATCTGATTT TAGGTAAGAC AGTACAGGGT AATACGAGCA GATACGAAAC CACGCTCTAA
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| Protein sequence | MDFDYIIVGA GSAGCVLANR LSADPANSVL LLEAGGPDSK MEIQIPAAYT KLHGSTVDWG
FWTEPQQALN GRRMYQPRGK TLGGCSSTNA MAYVRGNRLD YDDWASYGNS GWGYDDVLPY
FIRSEHNEQF DQLDPRYHGQ NGPLNVTFAT RFQTPLAGAF VNACIQSGIR KNDDYNGAEQ
EGTGLFQFTI RDGRRHSAAT AFLKPALNRP NLKVITHAHT KQILIEQDRA TGVEFIIGKN
QTQQAKARKE VILSAGAFQS PQLLMLSGVG PADTLRSAGV PVKKELPGVG QNLQDHLFSG
VSSLCSQRGI SANFHLKPLN QLKGLAQFFI SKKGPMTISP LEAVAFLQTD QLSRADADAG
RIDMQLHFAP VHFDTTDKTD FYDLTTYPVT DGYTVLPTLL KPKSRGYVGL RSGNPLDAPV
IQPNYLTDEQ DRQVLLSGLR KTIEVMHADA FGPYSRGINV PAVHASDDDL WQHVLSVLET
VYHPVGTCKM GPTSDELAVV DADLRVRGIE GLRVVDASIM PTIVSGNTNA PVIMIAEKAA
DLILGKTVQG NTSRYETTL
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