Gene Slin_5648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5648 
Symbol 
ID8729422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6875901 
End bp6877175 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content53% 
IMG OID 
ProductGlu/Leu/Phe/Val dehydrogenase 
Protein accessionYP_003390412 
Protein GI284040482 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATATA TTGAACCAGC TCCGATAAAA GACAAGGAGA ATCCGCTTGA GTCAATGATG 
TCGCGTTTCG ATGCCGCTGC CAAACTGGTA GGCATTTCGG ACGAAATGTA TGATATATTG
AAAGTTCCCG CCCGGCAGGT AATTGTAGGG CTGCCCGTTA CCATGGACAA CGGGTCTATC
AAGGTTTTTG AAGGCTACCG GGTTATTCAT TCCAATATTC TGGGGCCAGC TAAAGGGGGT
ATTCGGCTTG ATCCGGGTGT GCACCTCGAT GAGGTTCGGG CCCTGGCTGC CTGGATGACC
TGGAAATGCG CCGTAGTCGA TATTCCATAT GGAGGGGCCA AAGGAGGAAT TGCCTGCAAT
CCCCGCGAAA TGTCGGCCGG TGAGATCGAA CGACTTATTC GGCAGTACAC CGTTGCCATG
CTCGATGTTA TTGGTCCCGA CCGTGATATT CCGGCTCCGG ACATGGGGAC TGGTCCACGC
GAGATGGCCT GGATTGTCGA TGAGTACTCG AAAGCGAAAG GTATGACCGT CAACAACGTG
GTAACGGGTA AACCGCTTGT TCTGGGTGGG TCGCTGGGCC GTACTGAAGC AACGGGACGG
GGAGTTACGG TGGCCGCTCT GGCTGCCATG GATAAATTGC GCATGAATCC CTATCGGGCT
ACGGCCGCCA TTCAGGGCTT TGGAAACGTT GGGTCTTTTG CGGCTGAACT CCTCCACGAA
CGGGGCGTTA CGGTAGTGGC CATCAGCGAT ATTTCGGGCG GTTATTATAA CAAAAGTGGT
ATCGACATCA CGGCTGCTGT AGCGTACCGC AACAAAAACA AAGGAACGCT GGAAGGGTTT
GACGGGGCTG AGAAAATATC GAATGAAGAA CTCCTGTCTC TGGCGGTAGA CGTGCTGGTT
CCGGCGGCCA AGGAAGACGT TATTACGGAA GATAATGCAG CCTCGATTCA GGCTAAAATG
ATCGTGGAGG GCGCCAACGG ACCAACATCG GCCAGTGCCG ACGAGATTAT CAACAGCAAA
GGTATTCTGG TCGTGCCCGA TATTCTGGCT AATGCCGGTG GCGTTACGGT TTCTTACTTT
GAATGGGTAC AAAACCGCAT CGGTTATAAG TGGACGCTCG ACCGGATCAA TCGTCGGGCC
GACCGGGTCA TGAAAGACGC CTTCGACCGC GTGTTCGATA CCTCGCAACG TTATCAGGTA
CCGCTGAGAC TGGCCGCTTA TATTGTTGCT ATTGACAAAG TGTCGAGCAC CTATAAATTC
CGAGGAGGAT ATTGA
 
Protein sequence
MGYIEPAPIK DKENPLESMM SRFDAAAKLV GISDEMYDIL KVPARQVIVG LPVTMDNGSI 
KVFEGYRVIH SNILGPAKGG IRLDPGVHLD EVRALAAWMT WKCAVVDIPY GGAKGGIACN
PREMSAGEIE RLIRQYTVAM LDVIGPDRDI PAPDMGTGPR EMAWIVDEYS KAKGMTVNNV
VTGKPLVLGG SLGRTEATGR GVTVAALAAM DKLRMNPYRA TAAIQGFGNV GSFAAELLHE
RGVTVVAISD ISGGYYNKSG IDITAAVAYR NKNKGTLEGF DGAEKISNEE LLSLAVDVLV
PAAKEDVITE DNAASIQAKM IVEGANGPTS ASADEIINSK GILVVPDILA NAGGVTVSYF
EWVQNRIGYK WTLDRINRRA DRVMKDAFDR VFDTSQRYQV PLRLAAYIVA IDKVSSTYKF
RGGY