Gene Slin_5643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5643 
Symbol 
ID8729417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6872803 
End bp6873240 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content46% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390407 
Protein GI284040477 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACATT TCGTAAAGAC CCTACTCGTT GGAGTAAGCA CGGCTTTTGT CCTTCTGATG 
CTGAACTCCA CTGCTCACTG CCAATCGGCC GATCAGAAGG TGTATACAGT TCCCGAGGTT
CAGCCGGAGT TTCCCGGCGG CTATACTGCG TTAAGCCGAT ATTTGGCCGA AACCATAAAA
GTACCGGGCT CTATGGTTCG TAAACATTAT GACACCGGGC CTATAGCGGC CAAGTTTATT
GTCACTGATA TTGGTTACAT CCAGGATGTA CGCATCACTA TGAAACCACT CGATAAGAAG
ACGTTGAAGG GTGTTCAGAG CTACATCACA AATATCATCG CTGCCATTGA AAAGATGCCA
CGCTGGCAAC CGGGTAAGGT AGGCGGGAAA GACGTAGCGG TATTTTATAC CTTACCAATT
GAAATAACAA TACAGTAA
 
Protein sequence
MKHFVKTLLV GVSTAFVLLM LNSTAHCQSA DQKVYTVPEV QPEFPGGYTA LSRYLAETIK 
VPGSMVRKHY DTGPIAAKFI VTDIGYIQDV RITMKPLDKK TLKGVQSYIT NIIAAIEKMP
RWQPGKVGGK DVAVFYTLPI EITIQ