Gene Slin_5632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5632 
Symbol 
ID8729406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6861031 
End bp6862356 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content53% 
IMG OID 
Productaspartate kinase 
Protein accessionYP_003390396 
Protein GI284040466 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000704481 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGTCT GGAAATTTGG CGGCACATCG GTCGGGAAGC CCGAGCGTAT GCACTCCATT 
CGTACGCTGA TCACCAGCGA CGACACCCGT AAAATCGTCG TACTGTCGGC TCTGTCCGGC
ACTACCAACG CACTGTTAGC TATTGGCGAA TCACTGAAAG CGAACAATGA TGCCGATGCA
CACGCTAAGA TCGACGCGTT GAAAGCGCAT TACGATACGT TCCTGAGCGA ACTCTATAAA
ACCGCCGACG GAAAAGCGGC TGGTCAGAAG ATAGTGGACA GCGAATTCTC GTTTATCCGC
TCGCTGACGG GTATAAAGCC GTTTACCCTG AAGCAGGAAA AAGAACTGGT GGCCGAAGGT
GAGTTGCTAA GTACACAGAT TTTCCAGGCG TATCTGGTCG AAGAGGGTGT TCCATCTACG
TTGTTGCCCG CGCTGGAATT CATGCGCATC GACGCCGATA ACGAGCCCGA AATTCAGTAT
ACCGAAGCGA AACTCGCCGA ATTGCTGCCT GCTCATACCG ACAAACAGAT CATTGTTACC
CAAGGCTTTA TTTGCCGGAA TCCACGGGGC GAAGTCGATA ACCTCAAGCG CGGTGGCTCG
GATTATACCG CTTCGCTAAT TGGCGGTGCC ATTCGGGCGG AAGAGATCCA GATCTGGACC
GACATCGACG GGATGCACAA CAACGACCCC CGCATCGTTA AAAACACCTT TCCCGTTCGC
GAGCTGACCT TCGACGAAGC GGCTGAGCTG GCGTACTTCG GTGCAAAAAT TCTGCACCCG
TCTACCATCA CGCCCGCCCG GATGTTCGGT GTACCCGTTC GTCTGAAGAA CACCATGGAC
CCAGCTGCCC CCGGCACCCT CATCGCCGAC CGGACCTCCA GCGAGGTCTT CAAAGCGATC
GCGGCCAAAG ATGGCATTAC GGCTCTGTAC ATCCACTCGA CCCGTATGCT GAACGCGTAT
GGGTTTCTGC GTCGTATTTT CGAGATTTTC GAGAAGTACA AAACGCCGGT CGATATGATA
ACGACCTCCG AAGTATCCGT GTCGGTAACG ATTGACAATA CCGAGCGTCT TCAGGAAATT
ACGGACGAGT TGAACACGTT CTGTACGCTC GAAGAACCCG ACCACGACCA GACCATCATC
TGCATTGTAG GAAATTTCAG TGCCGACAAC GAAGGGGTTG CCGTTCGGGT GTTCAACGCC
ATGAAAAACA TTCCGATTCG AATGGTCTCA TATGGCGGCA CAGAAAGCAA CCTGTCGCTG
CTGGTTCATG GTCGCTACAA AGCCGATGCG CTGAATGCCT TGAACGACGG CTTATTTTCC
GTGTAA
 
Protein sequence
MHVWKFGGTS VGKPERMHSI RTLITSDDTR KIVVLSALSG TTNALLAIGE SLKANNDADA 
HAKIDALKAH YDTFLSELYK TADGKAAGQK IVDSEFSFIR SLTGIKPFTL KQEKELVAEG
ELLSTQIFQA YLVEEGVPST LLPALEFMRI DADNEPEIQY TEAKLAELLP AHTDKQIIVT
QGFICRNPRG EVDNLKRGGS DYTASLIGGA IRAEEIQIWT DIDGMHNNDP RIVKNTFPVR
ELTFDEAAEL AYFGAKILHP STITPARMFG VPVRLKNTMD PAAPGTLIAD RTSSEVFKAI
AAKDGITALY IHSTRMLNAY GFLRRIFEIF EKYKTPVDMI TTSEVSVSVT IDNTERLQEI
TDELNTFCTL EEPDHDQTII CIVGNFSADN EGVAVRVFNA MKNIPIRMVS YGGTESNLSL
LVHGRYKADA LNALNDGLFS V