| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5621 |
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| Symbol | |
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| ID | 8729395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 6842801 |
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| End bp | 6846577 |
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| Gene Length | 3777 bp |
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| Protein Length | 1258 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_003390385 |
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| Protein GI | 284040455 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.879931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.634334 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCAA CGTTTGCTGC CGCTGTCATT TGGTTATGCA TGAGTAGTTT TAATGTGTTC
TCGTTACGAG CACAAGGGCT TACTTTTAGT CATTTAACGA CAAATCAGGG GCTCTCTCAA
AGCCATGTCA GCGCTATTCT TAAAGATAAA AAGGGCTTCA TGTGGTTTGG TACTGAAGAC
GGTCTGAATA AATACGACGG GTATACGTTC ACGCATTATA AAGAGGAGGT TGATAACAAA
AGCAGTATTT GTAATAGCAA TGTACATGAC CTACTGGAAG ATAAAGCCGG AAATCTGTGG
ATAGGTACAT CAAATGGCTT AGATCGGTTT GATAGGGGTA AAAATAGCTT TGCTCATTAC
CCGGGTGGCA CGTTGAACTA CACTATCAAC GACATTTTCC AGGATAGTAA AAACAGATTG
TGGCTGGGTA CCGATCAGGG TTTATTCCAG TTCAATTCGC AAACGGGTAC CTATAAACCA
CATCAGCAGA TTAACAGAGA GTTACGAAAG TACACTACCT ATGTTACCCG GGTTTTAGAA
GATAACAACG GTAATTTATG GATTGGAACC GAAAAAGGCC TGTATCAGTA CACTGCTGCA
ACTAACCGGC TTGTCCGTTA TGCCAAAAAA GCGCTATCAA CAACCAGTAT ACAGTCCGAT
TGGATCAAGG AATTGTATAA AGATGGTACA GGCACTATCT GGATAGGAAC GCACGGGGGC
GGGCTTTCGG TCTACGAGCA AAAAAGCGAT TCGTTTCGCA GCTTCCTGCA TAACCCCCTA
AACAGCCGCA GTATTGTCCA CAATGATATT CTCTCCGTAA TGGAAGATCG GAACGGTAAC
TTGTGGGTAG GTACCGAAAA CGGGGGCATT AGTATTTATG ACAAACGAAC GAATTTATTC
ACAAACTATC AGAACAACCC TGACGATACC GGTACGCTGA ATAACAATTC GGTCTATTGC
ATTTACCGGG ATAATGCTGA TAACATCTGG ATTGGCACCT ATGCCGGGGG GGTAAATTTT
GTGCCCAGAT TTGGCCGAAA CTTTGACTCT TATCGGCAGA TTGCCAACGA CCCCCGAAGC
CTGAGTAATA ATGTTGTATT ATCTATTTGT GGTGATCCGT CGGGGAACGA AAACTACGTC
TGGATCGGCA CCGATGGCGG AGGGCTGAAC CTGTTTGATC GTAAGACAAA ACGCTTCACG
CAGTACACAC ATTCTGATAA AGATCGAAAT TCGATTAGCA ACAACTATGT TATATCCGTA
ATTCGTGTAG CACCCGATGT GCTGGGGCTT GGGTTCCATA ATGGCGGATT TGACTTTTTT
AATGTTAAAA CCGGTATTGC CGAGCATCAT TTACCCAAAG CAAATGATAG TCAGAGCCTG
TCCATTTCCG ATGTAAACAA CCTGTTTAAA GACCGGGACG GGAATATCTG GATAGGTACC
TGGAAAGGTG GGCTCAACTT CTACAACGTC AAGGATGGTA CGTTCACCCA TTATCGTACA
AATCCTGATG ATAAAACAAG TATCAGTGAT GATATCGTAA CGGCTGTTTT TCAGGATATT
AACGGCGACA TCTGGGCAGG TACATACAAA GGCTTGAATC GACTTGATCG TGCGCGTAAA
CGCTTCACGC GGTACAAACA CGATCCTCAA AATAAGCACA GTCTGTCCAA TGATAATGTG
CAGTCTATTC GCGGAGCCGA TCATGGTAAC TTATGGATAG GTACCGTGGG CGGTGGTATA
AATTATTTTG ACACAAGTAA GCAGACGTTC AAAGCCTACA CCGAAAAAGA AGGACTGGCC
AGCAATATTG TTTTTGCTAT CCAGAAAGAT CGAAAAAATA TTCTTTGGCT GAGTACGAAT
AATGGACTCT CCCGGTTCGA TCCCCAAACG AAGACGTTTC AGAATTTTGG GCACTCCGAC
GGATTACAGG GAAACGAGTT CAGGGATAAT TCCAGTTTCC AGACTGCGGA CGGACAATTG
TTTTTTGGCG GTGTGAACGG GTTCAGTACG TTTCATCCGG ATAGCCTGAA AAAGAACACA
TTTATTCCGC CGGTCTACAT TACCGATTTT CTTGTTTTTA ACAAACCAGT TTCGGTTGGC
GATAAAAACG AACTGATTCA CAGTCATATC AGCGAAACAG ACCTGATTAC CCTATCGTAC
AAAGAATCCG TATTTACCTT CGAATTCGCT GCCCTCAATT ATACCGTCCC GGAAAAAAAT
CAATACGCTT ACAAACTGGA GGGGTTTGAT ACAGGATGGA ATTACATCGG TACAAAACGA
ACCGCAACCT ACACGAACCT CGATCCCGGC ACCTACACGT TCCGGGTGAA AGCCTCCAAT
AATGACGGGC TGTGGAACAG CGCAGGAACA TCACTGACAG TTGTTATTAC ACCCCCGTTT
TGGCTTACTT GGTGGTTCAA AACGCTCATG ACAGTGTTCT TGCTGGGAAC GCTCTACGGC
GTATATCGCC TGCGGGTCAA CCGGATAAAA GCACAACAGG TTTACTTGCA AAAAGAGGTA
CAGGCACGTA CCAGCGAGGT CTTGCAGCAG AAGCAGGAGT TACAGGATCA GGCACTCCAT
ATGCAGTTAC TCCAGGCGAA AGTAGAACAG CAGGCTGCCC AGCAGCAATT GATGGAAAGT
GAACAGCGCT TTCAGGAAAT TGCTGAAAAT GTTGATGAGG TGTTCTGGAT TCATTCGGCC
AATCCGTTTC GATTACTGTA TGTAAATACG GCTTTTGAGC GAGTCTGGAA CACGACCCTT
GAGCAATTAA AGGAAAGACC GCTTTCGTTT ATGGAAACCG TCCTCCCCGA AGATGTACCG
GCAGTGCGGA CATTCATGGA GCAGTATAAG GCGGGTATAG AGGGAGAGTT ATATTATAGA
TTACAGACTA AGGATGCGCC TTTACGCTGG CTGTTGATTC GTAGCTTCAC CATCCGTGAT
GAATCGGGCA ACGCACTGCG TCACATTGGA ATTGCCAGCG ATGTGACTGT TCAGAAAGAA
AAAGAGTTCG TGCTTCAGAA GTCGCTGCTG CGGGAGCAGG AGTTAAATCA GCTCAAGTCT
CAGTTTGTCT CAACGGCTTC TCATGAGTTC CGTACGCCGA TGACCACCAT TCAGTCTAGT
GTGGAACTGA TCAAGCTGTA TCTCGACGCG CCTGCTGCCA CTGCCCGGGC CTCCATCCAA
AAGCACCTGG GGGTAATTGA AAAGCAGATC GCCCAGTTTA GCTCGCTCCT GACCGATGTA
TTAACCATTG GTCAGATTGA AGCAGGGAAG ATAACGTACG TTCCCCGCGC AGAAGATGTC
GTTGGCCTTT GCGAGACCCT GATCGACACG CACTTCAGCG AACGGGCCGA TCACCGAAGC
GTTCGATTGC TTATCGAAGG AACGCCCCGC TGGGTGAGTC TGGATGCTAA ACTAATGACG
CATGTGCTGA TGAATCTGCT GTCGAATGCC TTTAAATTCT CGGTTACTAC ATCTCCCATC
CTTCGTATCA TCTTTTCGCC CAACAACCTA GTCTTACAAG TGATCGATGC CGGTATAGGC
ATCCCGGTTA AAGAGCAGAC TTCTCTGTTT CAGGCTTTCT TCCGGGGAAG CAACACCAAC
GGCATACAGG GTACCGGCCT GGGCCTGGTT ATTGCCCGTC AATTTGTGGA TTGTCACGGA
GGTACATTAG GGGTCGAGAG TAAGGAAAAA GTTGGAACTA CATTCACCAT AACGTTGCCG
CTGGCAGTTG GTGAACCGGT ACGTCAGGAA AATGCACCGG AGGCATTGAC GAGTTAA
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| Protein sequence | MKATFAAAVI WLCMSSFNVF SLRAQGLTFS HLTTNQGLSQ SHVSAILKDK KGFMWFGTED
GLNKYDGYTF THYKEEVDNK SSICNSNVHD LLEDKAGNLW IGTSNGLDRF DRGKNSFAHY
PGGTLNYTIN DIFQDSKNRL WLGTDQGLFQ FNSQTGTYKP HQQINRELRK YTTYVTRVLE
DNNGNLWIGT EKGLYQYTAA TNRLVRYAKK ALSTTSIQSD WIKELYKDGT GTIWIGTHGG
GLSVYEQKSD SFRSFLHNPL NSRSIVHNDI LSVMEDRNGN LWVGTENGGI SIYDKRTNLF
TNYQNNPDDT GTLNNNSVYC IYRDNADNIW IGTYAGGVNF VPRFGRNFDS YRQIANDPRS
LSNNVVLSIC GDPSGNENYV WIGTDGGGLN LFDRKTKRFT QYTHSDKDRN SISNNYVISV
IRVAPDVLGL GFHNGGFDFF NVKTGIAEHH LPKANDSQSL SISDVNNLFK DRDGNIWIGT
WKGGLNFYNV KDGTFTHYRT NPDDKTSISD DIVTAVFQDI NGDIWAGTYK GLNRLDRARK
RFTRYKHDPQ NKHSLSNDNV QSIRGADHGN LWIGTVGGGI NYFDTSKQTF KAYTEKEGLA
SNIVFAIQKD RKNILWLSTN NGLSRFDPQT KTFQNFGHSD GLQGNEFRDN SSFQTADGQL
FFGGVNGFST FHPDSLKKNT FIPPVYITDF LVFNKPVSVG DKNELIHSHI SETDLITLSY
KESVFTFEFA ALNYTVPEKN QYAYKLEGFD TGWNYIGTKR TATYTNLDPG TYTFRVKASN
NDGLWNSAGT SLTVVITPPF WLTWWFKTLM TVFLLGTLYG VYRLRVNRIK AQQVYLQKEV
QARTSEVLQQ KQELQDQALH MQLLQAKVEQ QAAQQQLMES EQRFQEIAEN VDEVFWIHSA
NPFRLLYVNT AFERVWNTTL EQLKERPLSF METVLPEDVP AVRTFMEQYK AGIEGELYYR
LQTKDAPLRW LLIRSFTIRD ESGNALRHIG IASDVTVQKE KEFVLQKSLL REQELNQLKS
QFVSTASHEF RTPMTTIQSS VELIKLYLDA PAATARASIQ KHLGVIEKQI AQFSSLLTDV
LTIGQIEAGK ITYVPRAEDV VGLCETLIDT HFSERADHRS VRLLIEGTPR WVSLDAKLMT
HVLMNLLSNA FKFSVTTSPI LRIIFSPNNL VLQVIDAGIG IPVKEQTSLF QAFFRGSNTN
GIQGTGLGLV IARQFVDCHG GTLGVESKEK VGTTFTITLP LAVGEPVRQE NAPEALTS
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