Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5610 |
Symbol | |
ID | 8729384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6827258 |
End bp | 6828292 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | histidine kinase |
Protein accession | YP_003390374 |
Protein GI | 284040444 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.741974 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCCTAA GTCCCCGTAT TATTGCGCTT TTGCTGGCCT GTCTGATTTC GGCTATGACG CTGATATTTC TGTCGTTTGT CGACGGGGCT ACCATGAACA TTCTTTTTGT AGCGGGTCTT TCGTCGTTTG CCATCTCGTT TTTTTTGGTT TTGTACGCTA TTGAGTTGCT TGTATTTCGC GAAGTGAACA AGATGTACAA GACTATTCAC AAACTGAAGA TCCGCGACTT CAACATCTCG CGGAAGGCGA TCATCAAGAA CACGAACCCG TTTAAAAAGC TGAACGACGA GATTTTCGTT TACGTCGCCA AAAAGCAGAA AGAAATTGAT GAATTGAAAC GCCTGGAGCT TTTCCGGCGG GAGTTTCTGG CCGATGTGTC GCACGAATTA AAGACACCCA TTTTTGCTGC TCAGGGTTTT ATTCATACCC TGATTGACGG GGCGGTTGAC GACGAACGGG TCCGGGACAA ATTTCTCTCC AAAGCCGCCA AAAGTCTCGA TGGGCTCGAT GCGCTGGTAA AAGATCTGGT AGCGCTCTCG CAACTGGAAA CGGGCGAAGT AAAAATGAAT TTCGACCGGG TTGACATGGC CCACGTTACG CACGAAATTT TTGAACAGCT GGAAAAAATT GCCCATGCCA AGCGAACCTC GCTTGTGTTA AAAAGTACGC CCCCTGGCCC TGTTTGGGTA AAGGCCGATG CCCAGCGTAT TCTACAGGTG ATGACCAACC TTATCGAAAA TGCGGTTAAA TACGGCAATG AAAACGGGCA TGTGCAGGTC AATCTGGAAG AAGACAAAAA ATTCGTTCTC GTTTCCATCC GCGACGATGG GCCGGGCATT CCTCCCGAAC ACTTAAGCCG GATCTTCGAG CGTTTCTACC GGGTAGAAAA AAGCCGCTCC AAAGACCGGG GCGGCACAGG CCTGGGACTG GCCATCGTAA AACACATCCT CAATGCCCAC AAATCGAAGA TTTCGGTCAT GAGCAAAGTC GATAAAGGAA CTACCTTCCG GTTCAAGCTG GAGCGGGTTG ATTGA
|
Protein sequence | MSLSPRIIAL LLACLISAMT LIFLSFVDGA TMNILFVAGL SSFAISFFLV LYAIELLVFR EVNKMYKTIH KLKIRDFNIS RKAIIKNTNP FKKLNDEIFV YVAKKQKEID ELKRLELFRR EFLADVSHEL KTPIFAAQGF IHTLIDGAVD DERVRDKFLS KAAKSLDGLD ALVKDLVALS QLETGEVKMN FDRVDMAHVT HEIFEQLEKI AHAKRTSLVL KSTPPGPVWV KADAQRILQV MTNLIENAVK YGNENGHVQV NLEEDKKFVL VSIRDDGPGI PPEHLSRIFE RFYRVEKSRS KDRGGTGLGL AIVKHILNAH KSKISVMSKV DKGTTFRFKL ERVD
|
| |