Gene Slin_5610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5610 
Symbol 
ID8729384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6827258 
End bp6828292 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content49% 
IMG OID 
Producthistidine kinase 
Protein accessionYP_003390374 
Protein GI284040444 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.741974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTAA GTCCCCGTAT TATTGCGCTT TTGCTGGCCT GTCTGATTTC GGCTATGACG 
CTGATATTTC TGTCGTTTGT CGACGGGGCT ACCATGAACA TTCTTTTTGT AGCGGGTCTT
TCGTCGTTTG CCATCTCGTT TTTTTTGGTT TTGTACGCTA TTGAGTTGCT TGTATTTCGC
GAAGTGAACA AGATGTACAA GACTATTCAC AAACTGAAGA TCCGCGACTT CAACATCTCG
CGGAAGGCGA TCATCAAGAA CACGAACCCG TTTAAAAAGC TGAACGACGA GATTTTCGTT
TACGTCGCCA AAAAGCAGAA AGAAATTGAT GAATTGAAAC GCCTGGAGCT TTTCCGGCGG
GAGTTTCTGG CCGATGTGTC GCACGAATTA AAGACACCCA TTTTTGCTGC TCAGGGTTTT
ATTCATACCC TGATTGACGG GGCGGTTGAC GACGAACGGG TCCGGGACAA ATTTCTCTCC
AAAGCCGCCA AAAGTCTCGA TGGGCTCGAT GCGCTGGTAA AAGATCTGGT AGCGCTCTCG
CAACTGGAAA CGGGCGAAGT AAAAATGAAT TTCGACCGGG TTGACATGGC CCACGTTACG
CACGAAATTT TTGAACAGCT GGAAAAAATT GCCCATGCCA AGCGAACCTC GCTTGTGTTA
AAAAGTACGC CCCCTGGCCC TGTTTGGGTA AAGGCCGATG CCCAGCGTAT TCTACAGGTG
ATGACCAACC TTATCGAAAA TGCGGTTAAA TACGGCAATG AAAACGGGCA TGTGCAGGTC
AATCTGGAAG AAGACAAAAA ATTCGTTCTC GTTTCCATCC GCGACGATGG GCCGGGCATT
CCTCCCGAAC ACTTAAGCCG GATCTTCGAG CGTTTCTACC GGGTAGAAAA AAGCCGCTCC
AAAGACCGGG GCGGCACAGG CCTGGGACTG GCCATCGTAA AACACATCCT CAATGCCCAC
AAATCGAAGA TTTCGGTCAT GAGCAAAGTC GATAAAGGAA CTACCTTCCG GTTCAAGCTG
GAGCGGGTTG ATTGA
 
Protein sequence
MSLSPRIIAL LLACLISAMT LIFLSFVDGA TMNILFVAGL SSFAISFFLV LYAIELLVFR 
EVNKMYKTIH KLKIRDFNIS RKAIIKNTNP FKKLNDEIFV YVAKKQKEID ELKRLELFRR
EFLADVSHEL KTPIFAAQGF IHTLIDGAVD DERVRDKFLS KAAKSLDGLD ALVKDLVALS
QLETGEVKMN FDRVDMAHVT HEIFEQLEKI AHAKRTSLVL KSTPPGPVWV KADAQRILQV
MTNLIENAVK YGNENGHVQV NLEEDKKFVL VSIRDDGPGI PPEHLSRIFE RFYRVEKSRS
KDRGGTGLGL AIVKHILNAH KSKISVMSKV DKGTTFRFKL ERVD