Gene Slin_5605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5605 
Symbol 
ID8729379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6820709 
End bp6821794 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390369 
Protein GI284040439 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTATTCA GCGCATTAAA CAACAAACCC ATGAAAATCC TGTGTAGTGT ATTGTTGTGC 
CTCTTACCGA TGCTCACCTG GGCTGGGGAG CATGAGGGTT TCGGCACCAT TGAAAAGAAG
AAGACTATTA TCAAACTGTT CGATGTGAGC AGCAACGATA ATCTTGTCGT CGACAACCAG
TTTGGCCAGG TATCGGTTGG TCTGTGGGAC AAAAGCGAAA TACGGGTGCA AATCACCATC
ATCGCCAATT CAGATTCCGA AGAGCGGGTA CAAAAGTTTA TGGATGCGGT ATCCATCGAA
GAGAAGCGCT CCGGTAACCA GATCACGGTT CGTACAAATT TTAGCCAGAG CAGTATCTCG
AACTGGAGCC TGGGGAAATG GAAAGACAAC GGTGAGCGCA ATTTCGTTAA GATCAATTAC
GAGGTGATGA TGCCCCGTCA GAACGCGTTG TCTGTTCGGA ACCGGTTTGG CGATACCAGC
ATTCCCGCTT TTCAGGCCCC TTTAACGGTC TACAGTCGAT ACGGCAACTT CAGTGCGGAT
GATCTGACCA GCCGCCAGAA CGACATCGAT GTGGCCTACG GTAAAGCAGA CATCGGGACT
ATGGGTCAGG GGAAAGTGGA TATGGCCTAT GGTAATCTGG AGTTGTCGAA AGCCAATGTA
CTGGTGCTGA CCAATAAATT TGGGAAGATG AATATCGGAG ATGTAGGCAA ACTGGATGCC
GATATCAATT ACTCAGGGGC TAAAATCGGG ACTATCCGCG AATCAGGTAA GATAAAACTT
GAGTTTTCGA GCGGCTTTCG AATCGACCAG TTGCCCAAAA CTGCCGATAT TCTGAATATC
CAGGCCGCTT ATTCATCAAT AGGGCTACCG TTAGACGATA GCAATGACTG CGATTTTGAT
GTGACGGTAA GTTATGGCAA CTTCAATTAC GGGTCTGGGG CAACAATGCA CTTCACCAGT
CAACCCAACG ACAATGATAA TCACCGTGGT CCCCGACTTA CCAAGCAGTA CATTGGTAAA
GTCGGCACTG GCTCCGGCAC TAAAGTGCGG GTGGTATCGA AGTTCGGGAA TGTGAGCTTT
AGGTAG
 
Protein sequence
MLFSALNNKP MKILCSVLLC LLPMLTWAGE HEGFGTIEKK KTIIKLFDVS SNDNLVVDNQ 
FGQVSVGLWD KSEIRVQITI IANSDSEERV QKFMDAVSIE EKRSGNQITV RTNFSQSSIS
NWSLGKWKDN GERNFVKINY EVMMPRQNAL SVRNRFGDTS IPAFQAPLTV YSRYGNFSAD
DLTSRQNDID VAYGKADIGT MGQGKVDMAY GNLELSKANV LVLTNKFGKM NIGDVGKLDA
DINYSGAKIG TIRESGKIKL EFSSGFRIDQ LPKTADILNI QAAYSSIGLP LDDSNDCDFD
VTVSYGNFNY GSGATMHFTS QPNDNDNHRG PRLTKQYIGK VGTGSGTKVR VVSKFGNVSF
R