Gene Slin_5585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5585 
Symbol 
ID8729359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6799229 
End bp6800251 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content42% 
IMG OID 
Product5'-nucleotidase 
Protein accessionYP_003390349 
Protein GI284040419 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTAG ACCTTTCAGA GACATTGGTT ATTGGTGTTT CCAGTCGTTC ACTCTTCAAC 
CTCGAAAAAG AGAATAAAAT CTTCGACGAA CAAGGCATTT CTGGATACAG GAAATTTCAG
CAGGAACATG AAAATGATCC GCTTGATAAA GGAACGGCTT TCCACCTTGT GCAAAGATTA
CTGCATCTCA ATGACGACGC TAAAAAGCGC ATTGTTGAAG TTGTAATCAT GTCTAGGAAC
AGTCCTGAGA CTGGTGTTCG TATTATGAAT TCAGTTCGTG ATTATGGACT GGATATAACG
CGAATGGCTT TCAGTGGAGG AAAGCCCCTG TCTCCTTACA TTGACGCTTT TGATATTGAT
TTGTTCTTGA GCAAAGATTT AAAAGACGTT CAAGCAGTAA TTGATTCTAA ACAATCTGCT
GCTGCGTACA TCTACGAGCC ACCAACAGAC TTTAACCCAA CAGACAACTC AGTTAGAATT
GCCTTTGATG CAGACGCAGT ACTTTTCTCT GACGAGTCGG AACACCGATA TAAAACGGAG
GGAATGGCTG CATTCCACAA GTATGAGAGT GAACATGAAG ACGAGCCGTT GGGAGAAGGG
CCTTTTGCAA ATTTGTTGAT CAAACTGTCT AAAATTCAGG AGCATCTGCC TACTACAATA
GAATTATCAC CATTAAGACT TGCAATCGTT ACCGCAAGGA ATGCACCATC ACATATGCGA
GTCATAAAAA CTTTGAGAAA TTGGGGAGTT TACGTTGACG AGGCCTATTT CTTAGGTGGC
TTGTCAAAAG ATAAAGTGCT TAAGGCTTTT GGAGCTCATA TCTTCTTTGA TGACCAAGAG
GTACATCTGA CTGACTCGTC AAAAGTCGTT CCTTCGGGTA GAGTTCCATA TGCTTCTGAC
TCACCGTTAT TGAGCGTAAA AAACGGAGAG ACGCGGGAGA TCGTGCTTGA ACTCCCTAAC
GATCAAGAAG TTATGGTAAA TGTTAAGTTA GCCGCAGAGA ATAATGCATC TTCTGAAAAC
TGA
 
Protein sequence
MALDLSETLV IGVSSRSLFN LEKENKIFDE QGISGYRKFQ QEHENDPLDK GTAFHLVQRL 
LHLNDDAKKR IVEVVIMSRN SPETGVRIMN SVRDYGLDIT RMAFSGGKPL SPYIDAFDID
LFLSKDLKDV QAVIDSKQSA AAYIYEPPTD FNPTDNSVRI AFDADAVLFS DESEHRYKTE
GMAAFHKYES EHEDEPLGEG PFANLLIKLS KIQEHLPTTI ELSPLRLAIV TARNAPSHMR
VIKTLRNWGV YVDEAYFLGG LSKDKVLKAF GAHIFFDDQE VHLTDSSKVV PSGRVPYASD
SPLLSVKNGE TREIVLELPN DQEVMVNVKL AAENNASSEN