Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5585 |
Symbol | |
ID | 8729359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6799229 |
End bp | 6800251 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | |
Product | 5'-nucleotidase |
Protein accession | YP_003390349 |
Protein GI | 284040419 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCATTAG ACCTTTCAGA GACATTGGTT ATTGGTGTTT CCAGTCGTTC ACTCTTCAAC CTCGAAAAAG AGAATAAAAT CTTCGACGAA CAAGGCATTT CTGGATACAG GAAATTTCAG CAGGAACATG AAAATGATCC GCTTGATAAA GGAACGGCTT TCCACCTTGT GCAAAGATTA CTGCATCTCA ATGACGACGC TAAAAAGCGC ATTGTTGAAG TTGTAATCAT GTCTAGGAAC AGTCCTGAGA CTGGTGTTCG TATTATGAAT TCAGTTCGTG ATTATGGACT GGATATAACG CGAATGGCTT TCAGTGGAGG AAAGCCCCTG TCTCCTTACA TTGACGCTTT TGATATTGAT TTGTTCTTGA GCAAAGATTT AAAAGACGTT CAAGCAGTAA TTGATTCTAA ACAATCTGCT GCTGCGTACA TCTACGAGCC ACCAACAGAC TTTAACCCAA CAGACAACTC AGTTAGAATT GCCTTTGATG CAGACGCAGT ACTTTTCTCT GACGAGTCGG AACACCGATA TAAAACGGAG GGAATGGCTG CATTCCACAA GTATGAGAGT GAACATGAAG ACGAGCCGTT GGGAGAAGGG CCTTTTGCAA ATTTGTTGAT CAAACTGTCT AAAATTCAGG AGCATCTGCC TACTACAATA GAATTATCAC CATTAAGACT TGCAATCGTT ACCGCAAGGA ATGCACCATC ACATATGCGA GTCATAAAAA CTTTGAGAAA TTGGGGAGTT TACGTTGACG AGGCCTATTT CTTAGGTGGC TTGTCAAAAG ATAAAGTGCT TAAGGCTTTT GGAGCTCATA TCTTCTTTGA TGACCAAGAG GTACATCTGA CTGACTCGTC AAAAGTCGTT CCTTCGGGTA GAGTTCCATA TGCTTCTGAC TCACCGTTAT TGAGCGTAAA AAACGGAGAG ACGCGGGAGA TCGTGCTTGA ACTCCCTAAC GATCAAGAAG TTATGGTAAA TGTTAAGTTA GCCGCAGAGA ATAATGCATC TTCTGAAAAC TGA
|
Protein sequence | MALDLSETLV IGVSSRSLFN LEKENKIFDE QGISGYRKFQ QEHENDPLDK GTAFHLVQRL LHLNDDAKKR IVEVVIMSRN SPETGVRIMN SVRDYGLDIT RMAFSGGKPL SPYIDAFDID LFLSKDLKDV QAVIDSKQSA AAYIYEPPTD FNPTDNSVRI AFDADAVLFS DESEHRYKTE GMAAFHKYES EHEDEPLGEG PFANLLIKLS KIQEHLPTTI ELSPLRLAIV TARNAPSHMR VIKTLRNWGV YVDEAYFLGG LSKDKVLKAF GAHIFFDDQE VHLTDSSKVV PSGRVPYASD SPLLSVKNGE TREIVLELPN DQEVMVNVKL AAENNASSEN
|
| |