Gene Slin_5579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5579 
Symbol 
ID8729353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6791861 
End bp6792688 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content49% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390343 
Protein GI284040413 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCT CACTGCTAAC GTTGACACTG CTAACGTTCG TCATTGTTCA TACCGACGCT 
CAAAAAACAC TCCCAAAACC GCTTCAGGAA CGTCGCGTCC GTGACACCTA CGTGGAAGAG
ATTACCTATA CCAACAAACG GCGCGAAGTC GCCATTGTGC GGACATTCAC GCCCGGCGGT
GAACGCATTA CGGAGGAGCA TTACGAGAAT TTCAATCAGG GTATTAAACA CGGGCTAACG
CGCTGTTGGT ATCCGAATGG GCAAATGTAC TGGTCTTCCA ATTTTAAGCA CGGTCAAACG
CACGGGCCAC TGCTGGTCTA TTACCCCGAT GGCTCACTGA AACGGCGCGA ATATTTCAAA
AATGAGGTGA GTCATAAGCG CGAGTGTTTC GATCTATTGG GCGAAGCGCA AACTTGCGAA
GCCTTTGCCA AACCAGCGAG CTTCGTTGGC ACAGACAAGG AATTTCTGGT CTCGATCCAG
CAAAAGCTCG ACGAAGCAGG CTACGTGCCT GACAACACCA CCCACATCAT CGGTTTTCAG
GGAGTCATAC AGGATAATGG CCAATTAACT CAGTTGATTA CGTTGTATAC CTTACCCGAG
ACAGATTATC TCGATCGCGA ATTTACCGAT AAAGTTAAGC AGGCACTGAT GCAGATTCCC
CAATGGCAAT CCGCTACGAT CGATGACCGG CCCGTTTCAT CAGCTTACGT ATTGGCGCTA
CGGTTAGTTG GAAAAGAGGT ACACCTGAGT CATTTAGTTG ACAGCTCGAT ACATCGCAGC
GCTAATCAGA TGTTTTTTCG GACCCCACGA AAGATAAGTA CTAATTGA
 
Protein sequence
MKVSLLTLTL LTFVIVHTDA QKTLPKPLQE RRVRDTYVEE ITYTNKRREV AIVRTFTPGG 
ERITEEHYEN FNQGIKHGLT RCWYPNGQMY WSSNFKHGQT HGPLLVYYPD GSLKRREYFK
NEVSHKRECF DLLGEAQTCE AFAKPASFVG TDKEFLVSIQ QKLDEAGYVP DNTTHIIGFQ
GVIQDNGQLT QLITLYTLPE TDYLDREFTD KVKQALMQIP QWQSATIDDR PVSSAYVLAL
RLVGKEVHLS HLVDSSIHRS ANQMFFRTPR KISTN