| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5566 |
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| Symbol | |
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| ID | 8729340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 6776440 |
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| End bp | 6778374 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | deoxyxylulose-5-phosphate synthase |
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| Protein accession | YP_003390331 |
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| Protein GI | 284040401 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGATTA CCCCTGGCAG TCTTCTTGCC ACCATCGATA CGCCCGAAGA TCTTCGTAAA
CTAGATAAAT CCCGTTTACC CCAGGTTGCT GATGAATTAC GTCAGTTCAT CATTGATGAT
GTATCTGTTT ATGGCGGCCA CTTCGGCGCC AGTCTGGGTG TAGTTGAATT AACCGTTGCT
CTTCACTACG TTTTCAACAC CCCCGACGAC CAGCTGGTCT GGGATGTAGG CCATCAGGCT
TACGGGCACA AAATCCTGAC CGGTCGGCGG GAGAAGTTTC ACACCAATCG ATTCTACAAG
GGCCTATCGG GATTCCCCAA ACGAAAGGAA AGCGAGTACG ACTCCTTCGG CGTTGGTCAC
TCATCGACTT CCATCTCGGC CGCGCTGGGC ATGGCCGTTG CCTCACAACT TCAGGGAAAT
ACGTCCCGGA ACCATATTGC CGTTATTGGC GATGGTGCCC TCACAGCAGG AGAAGCGTTT
GAAGGGATGA ACCATGCCGG TGCTACGGAT AGCAATCTGC TGATTGTCCT GAATGACAAC
TGCATGAGCA TCGACCCGAA CGTTGGGGCC TTGCGCGAGT ACCTTACCGA CATTACCACT
TCTCAGACGT ACAATAAAGT AAAAGACGAG ATCTGGAACC TGCTCGGCAA AATGGACAAA
CTAGGCAAAA CAGCGCAGGA GCTGGTTTCT CAGGTCCAGT CGGGTATAAA GAGTTCATTA
CTAGAACAAA GCAACCTGTT CGAGTCGCTT CATCTGCGTT ATTTCGGTCC GATCGACGGC
CACGACATCG ACCATCTGGT TAGTGTTCTG GACGATATGA AGCACATCCC CGGCCCTAAA
CTTTTACACG TTCTTACGGT AAAAGGCAAG GGCTATGGAC CGGCAGAGAA AGACCAGACC
AAATGGCACG CGCCCGGTCT GTTCGACAAA GTGACGGGGG TTATCCAGAA GAAAATTTAC
GATACGCCAC AACCGCCCAA GTACCAGGAC GTGTTTGGGA ATACGCTGGT TGAGCTGGCC
GAGCAGAACG CCCGTATTGT GGGGGTTACG CCCGCCATGC CATCGGGTTC GTCGATGAAC
ATTATGATGA AGGCGATGCC AACGCGGGCT TTCGATGTAG GCATTGCCGA ACAGCACGCC
GTAACGTTCT CGGCGGGTAT GGCTACGCAG GGTGAGGTTG TCTTCTGCAA CATCTACTCG
ACATTCATGC AGCGGGCCTA TGATCAGGTT ATTCACGACG TCTGCATTCA GGAACTGCCG
GTTATCTTCT GTCTCGACCG CGCCGGTTTT GCCGGTGCCG ATGGGCCTAC GCACCACGGT
GCCTATGACC TGGCCTACAT GCGTTGTATT CCGAACATGA TTGTGGCCGC GCCCATGAAT
GAGCAGGAAC TTCGCAACAT GATGTTCACC GCCCAATCAG ACGAGGTTCA GCAGGGTAAG
CAGGCCTTCA CCATCCGGTA TCCACGGGGC GAAGGCGTTA TGCCTAACTG GCGCACTCCC
CTCGAAAAAC AGGTGATTGG CCAGGGACGA ATGATCAGCG ATGGTGAAGA TGTCGCCATT
CTGACCATCG GCCACATCGG GAATTATGCC GTTCAAGCCA CGGAAATGCT GGCCAAAGAA
GGTATCCGTC CCGCTCATTT TGATATGCGC TACGTGAAAC CCCTGGACGA AACCCTGCTC
CATCAGATCT TCAGCCGTTT CGACCGGGTC GTGACCGTCG AAGATGGCTG CGTGATGGGC
GGGTTTGGTA GTGCGGTGCT GGAGTTCATG GCCAACAACG ACTACATGGC CCGCGTCAAA
CGCCTGGGAA TTCCCGACGC CGTGATTGAA CATGGTGAAC AGATCGAACT CCACCATGAG
TGTGGTTTCG ATCCGCAGGG TATTGCTGAT GCCGTTCGTG AACTGCTCTT TACAGGCCGC
GCTGTAACTG TCTAA
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| Protein sequence | MLITPGSLLA TIDTPEDLRK LDKSRLPQVA DELRQFIIDD VSVYGGHFGA SLGVVELTVA
LHYVFNTPDD QLVWDVGHQA YGHKILTGRR EKFHTNRFYK GLSGFPKRKE SEYDSFGVGH
SSTSISAALG MAVASQLQGN TSRNHIAVIG DGALTAGEAF EGMNHAGATD SNLLIVLNDN
CMSIDPNVGA LREYLTDITT SQTYNKVKDE IWNLLGKMDK LGKTAQELVS QVQSGIKSSL
LEQSNLFESL HLRYFGPIDG HDIDHLVSVL DDMKHIPGPK LLHVLTVKGK GYGPAEKDQT
KWHAPGLFDK VTGVIQKKIY DTPQPPKYQD VFGNTLVELA EQNARIVGVT PAMPSGSSMN
IMMKAMPTRA FDVGIAEQHA VTFSAGMATQ GEVVFCNIYS TFMQRAYDQV IHDVCIQELP
VIFCLDRAGF AGADGPTHHG AYDLAYMRCI PNMIVAAPMN EQELRNMMFT AQSDEVQQGK
QAFTIRYPRG EGVMPNWRTP LEKQVIGQGR MISDGEDVAI LTIGHIGNYA VQATEMLAKE
GIRPAHFDMR YVKPLDETLL HQIFSRFDRV VTVEDGCVMG GFGSAVLEFM ANNDYMARVK
RLGIPDAVIE HGEQIELHHE CGFDPQGIAD AVRELLFTGR AVTV
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