Gene Slin_5561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5561 
Symbol 
ID8729335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6769832 
End bp6771019 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content54% 
IMG OID 
Product8-amino-7-oxononanoate synthase 
Protein accessionYP_003390326 
Protein GI284040396 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTACTT CAACGGACTC GATTAACCAG ACTTTACTGG AGCGATTAGC GGTATATCGA 
CAGAAAGGGC TTTTAAGACA ACTCCGGATT GCGGATGAAG CCATTGACTT CTGCTCGAAT
GATTACCTGG GCCTGGCACG CTCCTCCCAA CTTAAGCAGG CTATCCAACA CGCCAATGCC
GAACACAGTA CGCTGCGGAC AGGTGCTACC GGCTCCCGTT TGCTGGCCGG TCAAACGACG
CTTGCTCAAG AGGTTGAGCA GGAATTGGCT CTTTTTTACG GAACAGAATC GGCTCTTGTA
TTTAATTCAG GTTACGATGC CAACATCGGT CTGCTGGCCT GCCTGCCTCA AAAAGGGGAT
ACCCTGCTAA CCGACGAACT GATTCACGCC AGTATGATCG ATGGTGCCCG GCTGAGTTAC
GCAACCCGTC ATCGGTTTCG GCACAATGAT CTGGCCGATT TGAAAGCCAA ACTGGAGGAC
GCATCCCGGC TGCAAAACGG ACAGATTTTT GTTGCCGTAG AATCGGTTTA CTCGATGGAT
GGCGATGTGG CCCCCCTTCG TGAACTGGCC GACCTCTGCG ACGAGTACGG GGCTGCTCTG
TTGGTTGATG AGGCACACGC CACGGGCGTC TATGGCTCTG AGAACGGGGC AAATGGGGAA
GGGTTGGTAG CCGCCCTGGG CCTAAAGGAC CGCGTGCTGG CCCGAGTGCA TACATTTGGG
AAAGCACTGG GGGTTCATGG AGCCGCTGTT GCAGGACCAG CCGTATTACG CGATTACCTC
ATCAATTTTG CCCGGCCCTT TATGTATACT ACAGCCTTAC CCCCGCATAG TTTACTGGCT
ATCCGTTGTG CACATGATCA GGTGAGAGCA GACTCCTCAG CACTGCAACA ACTCCATCAT
CAACTTACGT ACTTCCGTGG TCAGGTAGCC GAAAAACTAC CGGGCAGCCA ATGGAGCAAT
AGTCAATCGC CCATTCAGTG TCTTATCATT CCGGGAAATG ACCGCGCTCG TCGGGTAGCG
GCTGCCGCGC AGGCTACCGG GCTAGATGTG CGGGCCATAC TTAGCCCAAC GGTTCCGGTA
GGCCAGGAGC GATTGCGACT TTGCATCCAT GCCTTTAACA CAATCGATGA AATAGACCGG
CTGGTAGACG TTCTTCAAAA AGCGCTGGCC GAAACCAATA CACTATGA
 
Protein sequence
MLTSTDSINQ TLLERLAVYR QKGLLRQLRI ADEAIDFCSN DYLGLARSSQ LKQAIQHANA 
EHSTLRTGAT GSRLLAGQTT LAQEVEQELA LFYGTESALV FNSGYDANIG LLACLPQKGD
TLLTDELIHA SMIDGARLSY ATRHRFRHND LADLKAKLED ASRLQNGQIF VAVESVYSMD
GDVAPLRELA DLCDEYGAAL LVDEAHATGV YGSENGANGE GLVAALGLKD RVLARVHTFG
KALGVHGAAV AGPAVLRDYL INFARPFMYT TALPPHSLLA IRCAHDQVRA DSSALQQLHH
QLTYFRGQVA EKLPGSQWSN SQSPIQCLII PGNDRARRVA AAAQATGLDV RAILSPTVPV
GQERLRLCIH AFNTIDEIDR LVDVLQKALA ETNTL