| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5560 |
|---|
| Symbol | |
|---|
| ID | 8729334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 6768633 |
|---|
| End bp | 6769658 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | Alcohol dehydrogenase zinc-binding domain protein |
|---|
| Protein accession | YP_003390325 |
|---|
| Protein GI | 284040395 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCCA TACTGCTTGC TGAAAAAAAA CAACCCGTAC AACTTGTTGA TGCACCAACG
CCGACCGCCG GTCCAGGGCA GATACTGATC AAACTTAAAG CGGCTGCCCT GAATCACCGT
GATGTATTCG TCCAGCAGGG TTTGTACCCC GGCATTAAAC TCCCGGCCAT TCTGGGCTCC
GACGGGGCCG GGGTGGTGGC CGAGGTTGGT GAAGGTGTCG ATCCGGCCTG GAGGGAACAA
GCCGTTATTA TTAATCCAGG CTTGCATTGG GGGCCTAACC CCAGGTTTTA CGGGTCGGAC
TTTCGGATTT TAGGCATGCC CGATAACGGA ACGTTTGCGG AGTATGTTGT GGTCGATAAA
GCGTATGTGC ATCATAAGCC CGATCATCTT TCTTTTGAGC AGGCGGCTGC GCTGCCACTG
GCGGGCCTGA CGGCCTGGCG AGCACTCATG ACGCGGGCAG GCCTTCACAC ATCAGGTAGT
CCCGAAAAAG TGCTTGTAAC GGGTATTGGT GGTGGAGCCG CTTTATTTGC CCTGCAATTC
GCCGTGGGTG CCGGAGCCGA AGTTTGGGTA ACGTCCGGTT CAGAAGAAAA GCTGGGCAAA
GCCGCAGCTT TAGGTGCCGC AGGGGGCGTC AACTACCGCG AGTCGGACTG GGAAAAAACA
CTCATGACGC TTACGGGTGG CGAACGGAAA GGATACTTCG ACGTTATTAT CGATAGTGCG
GGAGGACCGG GCTTTACCAA ACTAATCGAC GCAGCGGCAG CAGGTGGGCG GATTGCTTTC
TTCGGTGGCA CTACGGGTAA TATCACCGAC ATCATGCCCC CCAAAGTGTT CTTCAAACAG
CTGTCTATTT TGGGCACGAC AATGGGTAAC GAACACGAAT TCGCGGATAT GCTGTCATTC
GTGACCGACA AGCAAATAAT ACCCGTGGTG GACGATATTT TCCCATTAGC TGATATGTCG
CAGGCCATGG AGAAGATGGA TACCGGCAAA CAGTTCGGTA AGATTGTTAT TAAAATAGGG
GATTAA
|
|---|
| Protein sequence | MKAILLAEKK QPVQLVDAPT PTAGPGQILI KLKAAALNHR DVFVQQGLYP GIKLPAILGS
DGAGVVAEVG EGVDPAWREQ AVIINPGLHW GPNPRFYGSD FRILGMPDNG TFAEYVVVDK
AYVHHKPDHL SFEQAAALPL AGLTAWRALM TRAGLHTSGS PEKVLVTGIG GGAALFALQF
AVGAGAEVWV TSGSEEKLGK AAALGAAGGV NYRESDWEKT LMTLTGGERK GYFDVIIDSA
GGPGFTKLID AAAAGGRIAF FGGTTGNITD IMPPKVFFKQ LSILGTTMGN EHEFADMLSF
VTDKQIIPVV DDIFPLADMS QAMEKMDTGK QFGKIVIKIG D
|
|---|
| |