Gene Slin_5555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5555 
Symbol 
ID8729329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6764849 
End bp6765658 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390320 
Protein GI284040390 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTAC AGAACATACT TAGCGATATT GAGAAAGTGG ATGGCGAGAT CTTCGACCGC 
CTGGCTCACG TCTCCCGTCG GGGCTTATTC AGCTCCCTGA CCAAAAAAAC GATTGCCGTA
GCCGCTCCGG CCATTATGGC TTCTGCCCTG ACAAAAGCCT ACGGGCAGTC GAGCGCCTTA
CCACAAGGTG TAAAAGATGT GCTTAATTTT GCACTGACTC TGGAATACCT GGAGTATCGT
TTCTACGACG CCGGGCGCAA TCTTTCGATG ATCCCAAGCG ATTACAGAGC AGCATTTGAA
CTGATCCGGC AGCACGAACA GGTACACGTT CGGTTACTGA AGTCGGTACT TGGCGCAGAA
GCGGTGGCCG AACCAAAGTT TGACTTCTCG GCAAAAGGAA CATTCACAGA TACGTTCACC
AACTTTGCCA CGTTCTCGGC CATCGCACAG ACCCTCGAAG ACACGGGTGT TCGGGCCTAC
AAAGGTCAGG CCGCTAATCT GATGCCAGCA CCCGCTATCT TACAGGTAGC TCTTCAAATC
CACGCGACCG AAGCCGCTCA CGCAGCGAAT GTACGCTACA TGCGTGGACA GAAAGGCTGG
ATTACGGGCG GCACGGCTGC CATGCAGGGA CTTCCGGCGG TTGTCAACGG GAATTATGCC
GGTGAAGAAA ATGTCACGCA GGCAGGTGTT AACCTTGTTT CGGCTTTGGC CGGTGACAGC
CGTATAACGC CCGACATGGT TAGCCAGGCG TTTGATGAAA TACTGACGAA AGATCAGGTA
CTGGCTTTGG TTACGCCTTT TCTGGCCTAA
 
Protein sequence
MNLQNILSDI EKVDGEIFDR LAHVSRRGLF SSLTKKTIAV AAPAIMASAL TKAYGQSSAL 
PQGVKDVLNF ALTLEYLEYR FYDAGRNLSM IPSDYRAAFE LIRQHEQVHV RLLKSVLGAE
AVAEPKFDFS AKGTFTDTFT NFATFSAIAQ TLEDTGVRAY KGQAANLMPA PAILQVALQI
HATEAAHAAN VRYMRGQKGW ITGGTAAMQG LPAVVNGNYA GEENVTQAGV NLVSALAGDS
RITPDMVSQA FDEILTKDQV LALVTPFLA