Gene Slin_5537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5537 
Symbol 
ID8729310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6745985 
End bp6746740 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content52% 
IMG OID 
Productimidazoleglycerol phosphate synthase, cyclase subunit 
Protein accessionYP_003390302 
Protein GI284040372 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.684619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.197723 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACAA AACGAATCAT TCCCTGCCTC GATATAAAAG ACGGTCGAAC GGTAAAAGGC 
ACCAACTTTG TCAACCTCCG CGATGCGGGC GACCCGGTTG CTCTGGCTGC CGTTTACGCC
GAACAGGGTG CCGACGAACT GGTATTTCTG GATATTACGG CCACCGTCGA TGAGCGGAAA
ACGCTTATTG AACTCGTACG CAACGTAGCC CACACAATTA ATATACCTTT TACCGTTGGG
GGTGGTATCT CGTCCGTTGC CGATGTTTCT GCACTGCTCA ATGCCGGAGC GGATAAGATT
TCCATCAATT CGTCGGCCGT TCGTAATCCG GATCTGATCA ACGAACTCGC TTTGGAATTT
GGCAGTCAGT GCGTTGTTGT GGCTATTGAC ACACGCTTTG TAAACGGCGA ACACATCGTT
CACACGCATG GCGGACGTAA GCCTACGGAG CTTCGCACGA TTGCCTGGGC CAGAGAGCTG
GAAGAGAGGG GAGCAGGTGA AATTCTGCTA ACGTCAATGG ATACCGACGG TACCAAAGCT
GGTTTTGCCC TTGAGCTAAC GGCCCAAATT TCGGGAGCAG CGAACATTCC CGTCATAGCC
TCGGGCGGAG CGGGCACTAT GGATCACTTC GTCGACGTGT TCACCACCGG CAAAGCTGAT
GCCGGACTAG CCGCCAGCAT TTTTCACTTC AAAGAAATTG AGATTCCCGA TCTGAAAGGG
TATTTACGGG AAAAAGGAAT CGAAATGCGG ATTTGA
 
Protein sequence
MLTKRIIPCL DIKDGRTVKG TNFVNLRDAG DPVALAAVYA EQGADELVFL DITATVDERK 
TLIELVRNVA HTINIPFTVG GGISSVADVS ALLNAGADKI SINSSAVRNP DLINELALEF
GSQCVVVAID TRFVNGEHIV HTHGGRKPTE LRTIAWAREL EERGAGEILL TSMDTDGTKA
GFALELTAQI SGAANIPVIA SGGAGTMDHF VDVFTTGKAD AGLAASIFHF KEIEIPDLKG
YLREKGIEMR I