| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5516 |
|---|
| Symbol | |
|---|
| ID | 8729284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 6713597 |
|---|
| End bp | 6714316 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | |
|---|
| Product | phosphoribosyltransferase |
|---|
| Protein accession | YP_003390281 |
|---|
| Protein GI | 284040351 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCTCG CCGTTCAAAG AATTTATCTA CTGTTTGCCG ATTTTGTCGA TCTGCTCTAT
CCAACTCTTT GTGTGGGCTG TGCTAAATCG CTCGGGTTTA ACGAAAGGGT GTTGTGTACA
AAATGCCGAA TCAATCTTCC CGAAACGTAT CAGCACAGGG AACCGTATGA TGACAATCTC
CTCAATAAGT TTGCCGGAAA AGTCCCTGCT CGTTTCGTAA CATCATTTGT GTACTTTAAA
AAAGGGGGAA TTGTCCAGAA ACTAATCCAT AAAATAAAGT ACAAGGGGCA AAAAGAAGTC
GCTAAAGAAA TAGGTTGCTG GTACGGGTAT CAGTTGGCTA GTGAAAGTAA ATTACTGACG
GGTATCGATC TTTTTATCGG GGTTCCTCTA CACAAGAGCC GCCTTCGGCA ACGCGGTTAT
AATCAGGCGG ATTGGATTGC AAAAGGACTC TCTGAAGCCC TTAACATACC TGTTGCTGAA
GATGTTTTAA TATGCCGGAA ATTTAAGGAT TCGCAGACTC GGAAGAATCG AATGCAACGT
TGGGAAAACG TTAAAACAGT ATTTTCTGTC CAGGACGCCA GCGAGGTAAA CGGTAAACAT
ATTGTTCTAG TCGACGATGT TCTTACCACT GGAGCAACTC TGGAAGCCTG TGCTGTCGAA
CTTCTTAAAT CGGGTTGCAA ATCTGTCGGA TTTATAACGC TGGCTGCCGC GAATAGATAA
|
|---|
| Protein sequence | MHLAVQRIYL LFADFVDLLY PTLCVGCAKS LGFNERVLCT KCRINLPETY QHREPYDDNL
LNKFAGKVPA RFVTSFVYFK KGGIVQKLIH KIKYKGQKEV AKEIGCWYGY QLASESKLLT
GIDLFIGVPL HKSRLRQRGY NQADWIAKGL SEALNIPVAE DVLICRKFKD SQTRKNRMQR
WENVKTVFSV QDASEVNGKH IVLVDDVLTT GATLEACAVE LLKSGCKSVG FITLAAANR
|
|---|
| |