Gene Slin_5503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5503 
Symbol 
ID8729271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6695707 
End bp6696501 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390268 
Protein GI284040338 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0614253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAT ACACAGCTAC CAAAATAAAT GAGTCAATAC CAATCGACGG AGACCTGACG 
AAAGCTATCT GGCAGCAAAC CGTCTGGAGC CCCCGATTTG TCGACATGGC TTCCGGCGCA
CCAGGGATGT ACGATACCAA AGCGGCTATC GTCTGGAACG ACACGCACTT GTACGTTGCC
TTTCAGGCTG AAGAGCCTTT CGTAGAAGCG CACCTGACCG AACGCGATTC CATCATCTTT
TTGGAAAGCG ACCTGGAACT CTTTATCGAC GGGGGAGACT GTTATTACGA ATTGGAAGTG
AATGCCCGAA ACACGGTATA TGAAGTGTTT TTTATCTGGA AAGACGCCTA CCAGCGGGGC
AGCCGGTTCG ATACCCCACA GTTCGACGTT TTCAGTCCGC AGGCGCTCAC GTTTGGCGGT
GACCTTGACC GCAGCGGTTC CTCGTTCTGG TATGGCACGC ACCCGCGTGG CCTGCGCTGG
GCTTTTCTAA ATTACGACAT GCCGGGCCTG GAAACGGCCG TTCAAATTGA TGGTACCCTT
AATGACAACA GCGACATTGA TAAAGGCTGG ACACTGGAAA TTGCCATTCC GTGGGCCAGC
CTAACGGTAT TAGCTAACGG TCGAAACCTG CCTCCTCAAC CCGGCGATGA ATGGCGGATG
TTTCTGGGCC GATTCCAGAA AATGATGGTT TCTGGGCAGG AAGTGCAGCC CCACCCGGCC
ATGGTCATGA CGCCCCACGG TGTGTACGAC ACCCATCAAC CGGAGAAATG GAGCCGGGTG
GTGTTTGCAG AATAA
 
Protein sequence
MEEYTATKIN ESIPIDGDLT KAIWQQTVWS PRFVDMASGA PGMYDTKAAI VWNDTHLYVA 
FQAEEPFVEA HLTERDSIIF LESDLELFID GGDCYYELEV NARNTVYEVF FIWKDAYQRG
SRFDTPQFDV FSPQALTFGG DLDRSGSSFW YGTHPRGLRW AFLNYDMPGL ETAVQIDGTL
NDNSDIDKGW TLEIAIPWAS LTVLANGRNL PPQPGDEWRM FLGRFQKMMV SGQEVQPHPA
MVMTPHGVYD THQPEKWSRV VFAE