Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5501 |
Symbol | |
ID | 8729269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6692955 |
End bp | 6694235 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | metallophosphoesterase |
Protein accession | YP_003390266 |
Protein GI | 284040336 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00552786 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCGTA CTGCCTTATT TTTCATTCTT CCTGCTATTC TGCTACTGAT CGACTGGTAC GTTTTTCAGG CCGTTAAAAC CCTCAGCCGC TCAGCTACGG AAAGCACTCA ACGCATTATC ACTATTGCTT TTTGGGGGTT TACAGTGTTA TCGCTGGTGC TGTATATCAT CATGCAACTG CTTCCCCCCG ATTCCATCAG CCGAAACACC CGTACGTTTC TTTGGGCCGT TATCGCCATC CCCTATTTCT CGAAAATCTT TGCCGTTCTC ATTATCCTGA TCGACGACAT TGGCCGGTTC TTCCGGTGGA TTGTATCGCT GTTTTATAAG CCTGAAGTTC GGGAAGCGGT TGAGGATTCG ACGCAGAAGA CAATACCCGC AACGGACACT ATTACCCGAT CCGATTTTCT GATGAAAACG GCGCTGGTTG TTGGTGCGGT GCCGCTGGTT GGTTTTACCT GGGGAATTGT TTCAGGAGCG CACGATTACC GAATCCGGCG AATTAAGCTC CCGTTGAAAA ACCTGCCCTC CGGCTTCAAT GGCATGACCA TTGCCCAGAT CTCGGATATT CACTCGGGTA GCTTTTTTAA TAAAACGGCC GTAAAAGGGG GCGTAGAGAT GCTTCTTGGC CAAAAGCCCG ATATGGTCTT CTTCACCGGC GATCTGGTCA ATAGCCATGC CGAAGAAGTG AACAGCTACA TCGACATCTT CAACAAAGTA AAGGCTCCGC TGGGAGTGTA CTCGACCCTG GGTAATCACG ATTACGGGAA GTACGTACAA TGGCCAAGCG TACAGGCCGA ACGGCAAAAC GTGATGAACG TGGTAGCAGC GCACAAGCAA ATGGGCTGGA ACATTATGCT GGACGAAAAC AAAATTCTGG AGCAGAACGG CGACAAGATT GCGCTGATCG GCGTTCAAAA TCTTGGCTTC GGTCCGGCGG CTTTGCCGGT GGGCAATCTG GCCAAAGCTT ACGAAGGTAC TCAGGACTAT CCCGTCAAGC TGCTCCTCTC CCATGATCCG ACCCACTGGG ATGCCGAAGT CCGGCCGAAG TACCCGGATA TCGATGTTCA GTTCAGCGGC CACACGCACG GCGCTCAGTT TGGCGTCGAC CTGGGCGATG TGCGCTGGAG TCCGGCGCAG TACTTTTATA AGCAGTGGGC AGGCTTGTAT CAGGAGGGTG ACCAGCGTTT GTATGTGAAC CGGGGCTACG GCTACATAGG CTATCCCGGT CGTGTGGGTA TCCTCCCCGA GATTACCATT TTTGAACTGG TGAAAGCCTG A
|
Protein sequence | MNRTALFFIL PAILLLIDWY VFQAVKTLSR SATESTQRII TIAFWGFTVL SLVLYIIMQL LPPDSISRNT RTFLWAVIAI PYFSKIFAVL IILIDDIGRF FRWIVSLFYK PEVREAVEDS TQKTIPATDT ITRSDFLMKT ALVVGAVPLV GFTWGIVSGA HDYRIRRIKL PLKNLPSGFN GMTIAQISDI HSGSFFNKTA VKGGVEMLLG QKPDMVFFTG DLVNSHAEEV NSYIDIFNKV KAPLGVYSTL GNHDYGKYVQ WPSVQAERQN VMNVVAAHKQ MGWNIMLDEN KILEQNGDKI ALIGVQNLGF GPAALPVGNL AKAYEGTQDY PVKLLLSHDP THWDAEVRPK YPDIDVQFSG HTHGAQFGVD LGDVRWSPAQ YFYKQWAGLY QEGDQRLYVN RGYGYIGYPG RVGILPEITI FELVKA
|
| |