| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5483 |
|---|
| Symbol | |
|---|
| ID | 8729251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 6667262 |
|---|
| End bp | 6667639 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_003390248 |
|---|
| Protein GI | 284040318 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.387695 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTTA TCGAAACCCC CAATGCCCCG GTTCCGGGTG GCCATTACTC ACAAGCCGTT
GTGCATAACG GGCAGGTTTA TGTATCGGGC ATCTTGCCTA TTACACCATC CGGCGAGAAA
CTGACTAATG CCACCATTGC CGAACAAACG GAACAGATTC TGGCCAACCT CGATGCGATT
CTACAAGCGG CCGGGAGCCA GCGCAATAAG GTATTGAAAG TAACGGTCTT TATTGCCGAC
ATCAATGCCT GGGGCACCGT CAATCAACTT TATGCCCAGT TCTTCGGCGA CCACCGACCG
GCGCGGTCCG TTGTTCCCTG CTCTCCGCTG CATTACGGCT TTGGCATCGA GTTGGAAGCC
ATTGCCTTTC TTGAGTAA
|
|---|
| Protein sequence | MTFIETPNAP VPGGHYSQAV VHNGQVYVSG ILPITPSGEK LTNATIAEQT EQILANLDAI
LQAAGSQRNK VLKVTVFIAD INAWGTVNQL YAQFFGDHRP ARSVVPCSPL HYGFGIELEA
IAFLE
|
|---|
| |