Gene Slin_5471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5471 
Symbol 
ID8729238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6657387 
End bp6658154 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content57% 
IMG OID 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003390236 
Protein GI284040306 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCATC GAATCAACGG TCTTTCCCTC AATGTCCTTG AGTCGGGCAG CGGCTCATTG 
ACGCTGATTT TCTTACACTA TTTCGGTGGT TCGGCGCTGG AGTGGCAGGC CGTTATGAGC
CAGCTTTCGG GCCAATACCG CTGTCTGGCT ATCGACCTGC GCGGGCACGG CGATTCAGAT
GCGCCGGCAA CGGGCTATTC GGTCGATACG ATGGCCGATG ATGTTTTGGC GGTGATTGAC
TTGCTTCATG TACAGGAGTT TAGTTTGGTC GGGCATTCGA TGAGCGGCAA GGTGGCGCTG
GCAGTAGCCG CCCGTCGGCC CGCCGGGCTT CGGTCGCTGG TGCTGGTGTC ACCTTCACCC
CCCCTGCCGG AACCCATCCC CGACGATGAA CGGCAAAAAT TGCTGACCAG ACATGGGAAA
CGATCCTCGG CCGAGAAGAC CCTGAAGAAC ATCACCGAAG CGCCCGTTTC GGAAGCCGTT
CGGGAGCAGA TCATTGCCGA CGACCTGCGA ACGGCCAAAC CAGCCTGGGA TGCCTGGCTG
CTGGCGGGCA GTAAGGAAGA TATTTCGGAA CGGATGTCGG CCATCGACAG GCCGGTTCAC
ATCATTGTTG GCGCCGAAGA TCGGGCCTTG CCGCCAGAGG TACAACATCG GATGGTGCTG
CCATACCTGA AAAATGCGTC ATTTGATATA ATCGAAAATG CGGGCCACCT GCTGCCGTGG
GAAGTGCCGG ATAAGCTGAT AACTTTTATT CAGAAAAAAA TCAGCTAG
 
Protein sequence
MKHRINGLSL NVLESGSGSL TLIFLHYFGG SALEWQAVMS QLSGQYRCLA IDLRGHGDSD 
APATGYSVDT MADDVLAVID LLHVQEFSLV GHSMSGKVAL AVAARRPAGL RSLVLVSPSP
PLPEPIPDDE RQKLLTRHGK RSSAEKTLKN ITEAPVSEAV REQIIADDLR TAKPAWDAWL
LAGSKEDISE RMSAIDRPVH IIVGAEDRAL PPEVQHRMVL PYLKNASFDI IENAGHLLPW
EVPDKLITFI QKKIS