Gene Slin_5468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5468 
Symbol 
ID8729235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6653812 
End bp6654444 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390233 
Protein GI284040303 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGGC ACGGGCAGAT GCCCGCGCCA GTCACCATGC ACTACCCAAA ACATACCGTC 
CGTGACCTGC TCAAAAGCGA TCAGGTCACG GATGCCACGC GGCAGGTTCT GACAGAGCGT
TTAGCCCTAC CTTCACACCC GCCCACGTTC TTTACGGCTC AGGAATGTAA TTTACTCCAG
GCCATTTGTA TGCGGCTCAT TCCGCAGGAT GACCACGAGC AACTGATCGA CATTGCGGGC
AATATCGACA AACGGCTAAC CGAGCAGAAG TCCGACGGCT GGCGGTATGA TGTTATGCCT
GCCGACGGCG ACGCCTACAA ACTGGGGCTC AAAGGCATCG ACGAAAGTGC TCGCTTGCTC
TTTCAGCAGC CGCTTCTAAA CCTCTCAACC GAACAGCAGG ACATTGTTCT TGGCACCGTT
CAAACGAATG AGGCACCGGG CCAGATCTGG CAGCAGCTTC CTGCCGACCG CTTTTTTGAA
GAACTCCTAA CCGAAGCAGT TGAAAACTAT TATAGTCATC CGCTGGCCCA GGAGGAGATC
GGCTACGTCG GCATGGCCGA TGTACCGACC TGGCAACGTA TTGGCCTGAA CCAACTGGAA
GATCGCGAGC CAAGGGCGGA CGGTACACTA TGA
 
Protein sequence
MKRHGQMPAP VTMHYPKHTV RDLLKSDQVT DATRQVLTER LALPSHPPTF FTAQECNLLQ 
AICMRLIPQD DHEQLIDIAG NIDKRLTEQK SDGWRYDVMP ADGDAYKLGL KGIDESARLL
FQQPLLNLST EQQDIVLGTV QTNEAPGQIW QQLPADRFFE ELLTEAVENY YSHPLAQEEI
GYVGMADVPT WQRIGLNQLE DREPRADGTL