Gene Slin_5461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5461 
Symbol 
ID8729228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6643970 
End bp6645409 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content51% 
IMG OID 
Productmembrane bound O-acyl transferase MBOAT family protein 
Protein accessionYP_003390226 
Protein GI284040296 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.121132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTTTA GCTCAGCAAT ATTTTTGTTT CTGTATCTGC CCTCCTTCCT GATTGTCTAT 
TACCTGTTAC CGAAGCGCTG GCATAACCCC TTTCTGTTTT TTGCCAGCTT ACTGTTTTAT
GCCTGGGGAG AAGGTCCGGT TGTGTTGGTG CTCCTGCTCT CCGCTTTAAT TAATTACATA
GCAGGCCGTC TGATTGAACA AGGTCGGCGC CAGACCGGCT TATGGCTGTC GCTCATCGGT
AGCCTGTCGC TGCTCTTTTA TTACAAGTAC GCTAATTTCT TCGTTGATTC CATTCGCGGC
ACTGCCGAAA TCTTTGCCTT ACCCATTGGC CAAAGCCTGA CGCTCGGCCA CATTGCCTTG
CCAATCGGTA TTAGCTTTTA CACGTTTCAG GGTATTTCCT ACACCCTCGA CATTTACTGG
GGACGGATAA AAGCCAACCG GAGTTTTCTG GATTATGGCA CCTACGTAGC CATGTTTCCG
CACCAGATAG CCGGGCCTAT TGTCCGTTAC GCCGATATTG CTCCCGAACT GGCCGACCGG
TCCACTACCC TGGAGAAGTT CGGTGTGGGC GCGGAGCGAT TTATTCTGGG ACTGGCCAAG
AAAGTACTGC TGGCCAACAC CTTCGCCAGT CTGGCCGATA CCATTTTCAA TGCCCCGGCT
ACCAGTTACG GCACGGCAAC TGCCTGGCTG GGTATTATCG GCTATTCGCT CCAGATTTAT
TTCGATTTCT CAGGCTACTC CGACATGGCC ATTGGGCTTG GCAAAATGAT TGGGTTCGAC
TTTAAAGAGA ACTTCAACTA CCCCTACGTT GCCCGTTCCA TCCAAGACTT CTGGCGTCGG
TGGCATATTT CATTATCGAG CTGGTTTCGC GATTACGTGT ATATTCCCCT AGGTGGCAAT
CGAGCCAGCA AACTGCGCAC CTACCGCAAC CTGCTTATCG TGTTTTTTGT GACCGGACTA
TGGCATGGAG CAAGCTGGAA TTTCATCATC TGGGGGCTGT TTCACGGCCT GTTTCTGCTG
GTAGAACGAG CGGGACTCGG CAAACGTCTG GAACGGGTAT GGGCCCCTAT CACGCACGTC
TACACGGTGT TGGTTGTGCT GGTTGGCTGG GTGTTTTTCC GGGTCGAGAC ATTGCCGGAA
GCCATTCACT ACCTACAGAA AATGATCGGA CTGGGCACTC AGCCAACGGG CATCATGGCT
TATCCGCTGG CTTATTTTCT GAATGCCGAA TTAATCATTT CGCTATTGAT CGGTATTATC
CTGACAACGC CTGTTTACCC CTATTTTCAG CGGGGTCTGG AGCGGCTGAC AGCCCGGCTG
GCCCCCGTTG GCGTTTTCAT TAACTCGCTG TATGTAGCCG GTCTGTTTGG CTTGTTTGTG
TTAGCCGTTA TGTATCTGGC CGCCGACACG TATAACCCGT TTATTTATTT CCGCTTTTAA
 
Protein sequence
MLFSSAIFLF LYLPSFLIVY YLLPKRWHNP FLFFASLLFY AWGEGPVVLV LLLSALINYI 
AGRLIEQGRR QTGLWLSLIG SLSLLFYYKY ANFFVDSIRG TAEIFALPIG QSLTLGHIAL
PIGISFYTFQ GISYTLDIYW GRIKANRSFL DYGTYVAMFP HQIAGPIVRY ADIAPELADR
STTLEKFGVG AERFILGLAK KVLLANTFAS LADTIFNAPA TSYGTATAWL GIIGYSLQIY
FDFSGYSDMA IGLGKMIGFD FKENFNYPYV ARSIQDFWRR WHISLSSWFR DYVYIPLGGN
RASKLRTYRN LLIVFFVTGL WHGASWNFII WGLFHGLFLL VERAGLGKRL ERVWAPITHV
YTVLVVLVGW VFFRVETLPE AIHYLQKMIG LGTQPTGIMA YPLAYFLNAE LIISLLIGII
LTTPVYPYFQ RGLERLTARL APVGVFINSL YVAGLFGLFV LAVMYLAADT YNPFIYFRF