| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5458 |
|---|
| Symbol | |
|---|
| ID | 8729225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 6641184 |
|---|
| End bp | 6641822 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | MgtC/SapB transporter |
|---|
| Protein accession | YP_003390223 |
|---|
| Protein GI | 284040293 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0832768 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAGAAA TGGATTTTGC ACAGGAAGAC CTTATTCGTT TGATCGTTGC GCTGGTCATT
GGTGGAACAA TAGGTGCCGA GCGGGAGTAC AACGGTAAGT CGGCCGGGTT GCGAACGATG
ATTATGATTT GCGTGGGCTC CGCACTGTTC ACCATGATTT CGGGTCGTAT TGGCGGAACC
GGCGACCGCA TTGCGGCTAA CATTGTGAAT GGTATCGGCT TCCTGGGGGC GGGCATCATT
TTTCGGGAAG ATAACCGGGT CAAAGGGCTA ACCACGGCCG CTACCGTTTG GGCGGTGTCG
GCGTTGGGTA TGTGTGTAGG GGCGGGCCAT TACGATATTG CCATAATTGG GTTTATCTTT
ATTCTTGGAT CGCTGCTCCT GCTGCTCAGC TTATCGAGCC GTATCCAGAA AATGAACCAA
ACGCGTGATT ATAAGATTGT AACAGCATTT CATAACAAGA CGCTGAAGCA ATACGAAGAC
CTTTTCAGTG AGTTCAACCT TAAGTCGAAC CGCCACCAGC AACAGCGCAT TGGCACCGAA
ATTATTGGCA ACTGGCGGGT TAGCGGTTCC GAGCAAAATC ATGAAAAGTG CATTAAACGT
TTGTTGAGAG ACCCTGAGGT AAAAGAATTT ACCTTCTGA
|
|---|
| Protein sequence | MIEMDFAQED LIRLIVALVI GGTIGAEREY NGKSAGLRTM IMICVGSALF TMISGRIGGT
GDRIAANIVN GIGFLGAGII FREDNRVKGL TTAATVWAVS ALGMCVGAGH YDIAIIGFIF
ILGSLLLLLS LSSRIQKMNQ TRDYKIVTAF HNKTLKQYED LFSEFNLKSN RHQQQRIGTE
IIGNWRVSGS EQNHEKCIKR LLRDPEVKEF TF
|
|---|
| |