Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5451 |
Symbol | |
ID | 8729218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6629774 |
End bp | 6631276 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | protein of unknown function DUF1501 |
Protein accession | YP_003390217 |
Protein GI | 284040287 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAAC TCATTCAGGA ACTCCGGCAC GCTGCCGCCG AACGTGAAAC CCGGCGTCAT TTCCTGCATA CCTGCTCTAC GGGCCTGGGC GCTATGGCCC TTAGCTCTGT ACTGGGAAGC TGCGGCTTTT TCGGTAAAGA GAATCCAGAG GCTAATGCCG TCGGTGCTGC GTCGCTCTCC GGTGAGCCGA CGGCCCCGCA CCCTTCGCAG TATATTCCCA AAGCTAAACG GATCATTTAC ATCCACATGG CTGGTTCACC GAGTCAGTTG GAGTTGTTCG ATTATAAGCC CGAGCTGGCT AAGTATAACG GGAAAGACTG TCCGCAGGCT TTGCTCGAAG GGAAGAAATT TGCCTTTATT CGGGGTACTC CTAAAATGCT GGGGCCGCAG GGGAAATTCG CCCAGCGCGG GCAATCCGGG GCGTGGGTGT CCGACTACCT GCCCCATTTA CAGGGCGTAG TCGATGAGAT TTCGTTTCTC AAAGCCATGC ACACCGACCA GTTCAACCAC GCTCCGGCAC AACTGCTCAT GCATACCGGC AGTGCCCGTT TGGGACGGCC TAGCATGGGG TCGTGGGTGA CCTACGGCCT GGGTACCGAA AACGACAACC TGCCCGGTTA TATCGTGCTG GCATCCGGTG GGAAGCAGCC TGACGCGGGA AAATCGGTCT GGGGGAGCGG GTTCCTGCCA ACGGTTTACC AGGGCGTTCA GTGCCGCACC GATGGTGACC CGGTGCTGTA TGCCTCCGAC CCATCGGGGA TTAGCCGCGA CATTCGGAAG CAAACCATTG ACGCCATCAG CCAGATCAAC CAGCAGCAAT ATGACGAGGT CAAAGACCCT GAAATCCTGA CGCGCATTGC TCAATACGAA CTGGCTTTTC GGATGCAAAT GTCGGTGCCC GATGCGATGG ACATCAAGAG TGAACCGCAG TATATGCTGG ACAGCTACGG TGTCGATCCT AATAAGGGTT CCTTTGCGCG AAACTGCCTG CTGGCCCGGC GGCTGGTGGA GCGAGGTGTT CGGTTTGTGC AACTCTTCGA CTGGGGCTGG GACACCCACG GAACCAGCGC TGACGGGTCC ATCGACGTGG GTCTGAAAGC CAAGTGCAAG GAGTCAGACC AGGCGGTAGC GGCCTTGCTA AACGATCTTA AGCAGCGCGG TTTGCTGGAC GATACGCTGG TGGTTTGGGG CGGTGAGTTT GGCCGGACGC CCATGCAGGA AAACCGCGAC GGGCAAACGC TACCCTTTAT GGGGCGAGAC CACCACCTCG AAGCGTTCAC CGTCTGGATG GCCGGTGGCG GGGTGAAAAA AGGCTTCTCG TTCGGCGAAA CCGACGATAT TGGGTATTAC GGCGTCAAAG ACAAAGTGCA TATTCACGAC TTGCAGGCCA CGATTTTACA CCTGCTTGGC TTCGACCATA CCAAGCTGAC CTACCAGTTT CAGGGTAGAC CGTTTCGACT AACCGACGTG GCTGGAAAGG TTGTCAAACC GATTTTAGCG TAG
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Protein sequence | MNKLIQELRH AAAERETRRH FLHTCSTGLG AMALSSVLGS CGFFGKENPE ANAVGAASLS GEPTAPHPSQ YIPKAKRIIY IHMAGSPSQL ELFDYKPELA KYNGKDCPQA LLEGKKFAFI RGTPKMLGPQ GKFAQRGQSG AWVSDYLPHL QGVVDEISFL KAMHTDQFNH APAQLLMHTG SARLGRPSMG SWVTYGLGTE NDNLPGYIVL ASGGKQPDAG KSVWGSGFLP TVYQGVQCRT DGDPVLYASD PSGISRDIRK QTIDAISQIN QQQYDEVKDP EILTRIAQYE LAFRMQMSVP DAMDIKSEPQ YMLDSYGVDP NKGSFARNCL LARRLVERGV RFVQLFDWGW DTHGTSADGS IDVGLKAKCK ESDQAVAALL NDLKQRGLLD DTLVVWGGEF GRTPMQENRD GQTLPFMGRD HHLEAFTVWM AGGGVKKGFS FGETDDIGYY GVKDKVHIHD LQATILHLLG FDHTKLTYQF QGRPFRLTDV AGKVVKPILA
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