Gene Slin_5451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5451 
Symbol 
ID8729218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6629774 
End bp6631276 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content57% 
IMG OID 
Productprotein of unknown function DUF1501 
Protein accessionYP_003390217 
Protein GI284040287 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAC TCATTCAGGA ACTCCGGCAC GCTGCCGCCG AACGTGAAAC CCGGCGTCAT 
TTCCTGCATA CCTGCTCTAC GGGCCTGGGC GCTATGGCCC TTAGCTCTGT ACTGGGAAGC
TGCGGCTTTT TCGGTAAAGA GAATCCAGAG GCTAATGCCG TCGGTGCTGC GTCGCTCTCC
GGTGAGCCGA CGGCCCCGCA CCCTTCGCAG TATATTCCCA AAGCTAAACG GATCATTTAC
ATCCACATGG CTGGTTCACC GAGTCAGTTG GAGTTGTTCG ATTATAAGCC CGAGCTGGCT
AAGTATAACG GGAAAGACTG TCCGCAGGCT TTGCTCGAAG GGAAGAAATT TGCCTTTATT
CGGGGTACTC CTAAAATGCT GGGGCCGCAG GGGAAATTCG CCCAGCGCGG GCAATCCGGG
GCGTGGGTGT CCGACTACCT GCCCCATTTA CAGGGCGTAG TCGATGAGAT TTCGTTTCTC
AAAGCCATGC ACACCGACCA GTTCAACCAC GCTCCGGCAC AACTGCTCAT GCATACCGGC
AGTGCCCGTT TGGGACGGCC TAGCATGGGG TCGTGGGTGA CCTACGGCCT GGGTACCGAA
AACGACAACC TGCCCGGTTA TATCGTGCTG GCATCCGGTG GGAAGCAGCC TGACGCGGGA
AAATCGGTCT GGGGGAGCGG GTTCCTGCCA ACGGTTTACC AGGGCGTTCA GTGCCGCACC
GATGGTGACC CGGTGCTGTA TGCCTCCGAC CCATCGGGGA TTAGCCGCGA CATTCGGAAG
CAAACCATTG ACGCCATCAG CCAGATCAAC CAGCAGCAAT ATGACGAGGT CAAAGACCCT
GAAATCCTGA CGCGCATTGC TCAATACGAA CTGGCTTTTC GGATGCAAAT GTCGGTGCCC
GATGCGATGG ACATCAAGAG TGAACCGCAG TATATGCTGG ACAGCTACGG TGTCGATCCT
AATAAGGGTT CCTTTGCGCG AAACTGCCTG CTGGCCCGGC GGCTGGTGGA GCGAGGTGTT
CGGTTTGTGC AACTCTTCGA CTGGGGCTGG GACACCCACG GAACCAGCGC TGACGGGTCC
ATCGACGTGG GTCTGAAAGC CAAGTGCAAG GAGTCAGACC AGGCGGTAGC GGCCTTGCTA
AACGATCTTA AGCAGCGCGG TTTGCTGGAC GATACGCTGG TGGTTTGGGG CGGTGAGTTT
GGCCGGACGC CCATGCAGGA AAACCGCGAC GGGCAAACGC TACCCTTTAT GGGGCGAGAC
CACCACCTCG AAGCGTTCAC CGTCTGGATG GCCGGTGGCG GGGTGAAAAA AGGCTTCTCG
TTCGGCGAAA CCGACGATAT TGGGTATTAC GGCGTCAAAG ACAAAGTGCA TATTCACGAC
TTGCAGGCCA CGATTTTACA CCTGCTTGGC TTCGACCATA CCAAGCTGAC CTACCAGTTT
CAGGGTAGAC CGTTTCGACT AACCGACGTG GCTGGAAAGG TTGTCAAACC GATTTTAGCG
TAG
 
Protein sequence
MNKLIQELRH AAAERETRRH FLHTCSTGLG AMALSSVLGS CGFFGKENPE ANAVGAASLS 
GEPTAPHPSQ YIPKAKRIIY IHMAGSPSQL ELFDYKPELA KYNGKDCPQA LLEGKKFAFI
RGTPKMLGPQ GKFAQRGQSG AWVSDYLPHL QGVVDEISFL KAMHTDQFNH APAQLLMHTG
SARLGRPSMG SWVTYGLGTE NDNLPGYIVL ASGGKQPDAG KSVWGSGFLP TVYQGVQCRT
DGDPVLYASD PSGISRDIRK QTIDAISQIN QQQYDEVKDP EILTRIAQYE LAFRMQMSVP
DAMDIKSEPQ YMLDSYGVDP NKGSFARNCL LARRLVERGV RFVQLFDWGW DTHGTSADGS
IDVGLKAKCK ESDQAVAALL NDLKQRGLLD DTLVVWGGEF GRTPMQENRD GQTLPFMGRD
HHLEAFTVWM AGGGVKKGFS FGETDDIGYY GVKDKVHIHD LQATILHLLG FDHTKLTYQF
QGRPFRLTDV AGKVVKPILA