Gene Slin_5448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5448 
Symbol 
ID8729215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand+ 
Start bp6628118 
End bp6628843 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content52% 
IMG OID 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_003390214 
Protein GI284040284 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.568283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.618499 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTACA CAATCTGGTG CGCCACGTAT ATTGTTGTCT TATACCTATT GCTGTTTCCC 
ATCCAGTTTG TGCTTTTGCA ACGTGAGAAA TGGAAACCGC TGGCGCACAA GATTAATGCT 
ATCTGGGGGA AGCTGTTTTT TTGGGGTATT GGGATGCCGG TTCGCGTAGA TCGTCGCTTT 
CAGCCGGAAC CTAACCGGAC GTATGTCTTT TGCGCCAATC ACTTTTCGTA TCTGGACATA 
GCCGTAATGG GGATCATCGT GAAAAACTAT TACGCCTTTG TCGGTAAAAG TGACGTAAAG 
AATATTCCCT TGCTGGGGTA TATGTTCGCC AAACTGCACG TACAGGTCGA CCGGGATCGG 
CCCAACAGCC GGGCATATTC ACTGGCGAAG TCTATCCGGA CGCTGGCATC AGGGCGAAGC 
ATCATGATTT TCCCCGAAGG TGGCATCCGG GCACCGGAGC CTCCCCAGAT GGTGCCGTTT 
AAAGATGGCG CGTTCACAAT GGCGATTCAG CAGCAGGTGC CCATTGTACC GATCACGCTG 
GTAAACAATT ACCTGATTCT GCCGGACCGA AGCCCCGTAC GCTTTCACCG GCACCCATTA 
CGGGCCATCG TTCACCCACC TATCGAAACG ACCGGCATGA CGCAGGCCGA TGTAAAGCAG 
TTGAAAGAAG AAACTTATCG AATCATAAAC GCGGAGTTGA TGAGCAAGGA CAGAGTGCCC 
GCTTAG
 
Protein sequence
MLYTIWCATY IVVLYLLLFP IQFVLLQREK WKPLAHKINA IWGKLFFWGI GMPVRVDRRF 
QPEPNRTYVF CANHFSYLDI AVMGIIVKNY YAFVGKSDVK NIPLLGYMFA KLHVQVDRDR 
PNSRAYSLAK SIRTLASGRS IMIFPEGGIR APEPPQMVPF KDGAFTMAIQ QQVPIVPITL 
VNNYLILPDR SPVRFHRHPL RAIVHPPIET TGMTQADVKQ LKEETYRIIN AELMSKDRVP 
A