Gene Slin_5442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5442 
Symbol 
ID8729209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6617430 
End bp6617807 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content55% 
IMG OID 
ProductCrcB protein 
Protein accessionYP_003390208 
Protein GI284040278 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.258176 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.897038 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCGT ACATACTGGT TTTTTTGGGC GGTGGGGCTG GTAGTCTGCT TCGGTATGCT 
ACTGGCAGGC TCATGCCGGC CACGCTCCTG GGAACGTCTT TCCCTACGCC GATTCTGGTT
GTCAATGTAG TGGCCAGTTT TGTACTGGGC GCGGTGATGG GCTGGGTGCT GAGCCGGGCT
GTGGGCGACG ACCTGCGGCT GCTGCTAGGA GTCGGCTTTT GCGGAGGGCT TAGTACCTTC
TCCAGTTTTA GTAACGATAC CGTCGTGCTT CTGCAAAGTA ACCGGCCGGG AGCCGCACTG
ATTAATATTG GCCTTAATGT AAGCCTATGT TTACTGGCTT CGGCTGGCGG GCTATGGCTT
GGACAAAAAA CAGCATGA
 
Protein sequence
MNPYILVFLG GGAGSLLRYA TGRLMPATLL GTSFPTPILV VNVVASFVLG AVMGWVLSRA 
VGDDLRLLLG VGFCGGLSTF SSFSNDTVVL LQSNRPGAAL INIGLNVSLC LLASAGGLWL
GQKTA