Gene Slin_5435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5435 
Symbol 
ID8729202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6605928 
End bp6606674 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content47% 
IMG OID 
ProductHaloacid dehalogenase domain protein hydrolase 
Protein accessionYP_003390201 
Protein GI284040271 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTGCT ATCTTTGTTA CTCTCACTCG TTAACCAACA CGTTCATGAA ACTAATCGCG 
TTCGATGCCG ACGATACCTT GTGGGCCAAT GAGCCTAACT ACATAGATGT TAAGCAAAAG
ATGTGCGAAA TGCTCTCGCA TCATGTTGAT GAAGAGACGC TTTCGACCCG GTTTTACGAC
GCTCAAATCC GTAGTTTGCA AGTGTTTGGC TACGGTGCCA AGAGCTTTAT TCTCTCCATG
ATCGAAACGG CGATTGAACT CACCAACGGG GCCATCACTG GAGCCGAGAT TCAGCAGATC
ATTGACACAG GGCGAAAGCT GCTCGATTTT CCGATTGAGG TACTGGATGG GGTGAGTGAG
GTACTGGAAA CGCTGTCCAA ACAGTTCGAC CTGATGGTAC TCACCAAAGG CGATCTATTT
GACCAGGAGA GCAAAATAGC CCGGTCGGGG TTAGGACATT ACTTTAAGCA CGTTGAAATT
GTAAGCGAAA AGAATGAACA GACCTATCTG CGTATCCTGC AAAAATACAA TGTGCAACCC
ACCGATTTTC TGATGATCGG CAACTCGTTG AAATCGGACA TACTGCCTGT GATCCATATT
GGCGGTCGGG CCATTCACAT ACCCTATGCA ACGACTTGGG CCCATGAGAT GGTGGCGGAT
GAGCAACTGA TTGGTAAATC GTTTACGACG TTGACTAATG CGCGGGAGTT ACTAGAATTA
CTCGAAACAG TTAAAGACGA AGCGTAA
 
Protein sequence
MTCYLCYSHS LTNTFMKLIA FDADDTLWAN EPNYIDVKQK MCEMLSHHVD EETLSTRFYD 
AQIRSLQVFG YGAKSFILSM IETAIELTNG AITGAEIQQI IDTGRKLLDF PIEVLDGVSE
VLETLSKQFD LMVLTKGDLF DQESKIARSG LGHYFKHVEI VSEKNEQTYL RILQKYNVQP
TDFLMIGNSL KSDILPVIHI GGRAIHIPYA TTWAHEMVAD EQLIGKSFTT LTNARELLEL
LETVKDEA