Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5435 |
Symbol | |
ID | 8729202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6605928 |
End bp | 6606674 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | Haloacid dehalogenase domain protein hydrolase |
Protein accession | YP_003390201 |
Protein GI | 284040271 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTGCT ATCTTTGTTA CTCTCACTCG TTAACCAACA CGTTCATGAA ACTAATCGCG TTCGATGCCG ACGATACCTT GTGGGCCAAT GAGCCTAACT ACATAGATGT TAAGCAAAAG ATGTGCGAAA TGCTCTCGCA TCATGTTGAT GAAGAGACGC TTTCGACCCG GTTTTACGAC GCTCAAATCC GTAGTTTGCA AGTGTTTGGC TACGGTGCCA AGAGCTTTAT TCTCTCCATG ATCGAAACGG CGATTGAACT CACCAACGGG GCCATCACTG GAGCCGAGAT TCAGCAGATC ATTGACACAG GGCGAAAGCT GCTCGATTTT CCGATTGAGG TACTGGATGG GGTGAGTGAG GTACTGGAAA CGCTGTCCAA ACAGTTCGAC CTGATGGTAC TCACCAAAGG CGATCTATTT GACCAGGAGA GCAAAATAGC CCGGTCGGGG TTAGGACATT ACTTTAAGCA CGTTGAAATT GTAAGCGAAA AGAATGAACA GACCTATCTG CGTATCCTGC AAAAATACAA TGTGCAACCC ACCGATTTTC TGATGATCGG CAACTCGTTG AAATCGGACA TACTGCCTGT GATCCATATT GGCGGTCGGG CCATTCACAT ACCCTATGCA ACGACTTGGG CCCATGAGAT GGTGGCGGAT GAGCAACTGA TTGGTAAATC GTTTACGACG TTGACTAATG CGCGGGAGTT ACTAGAATTA CTCGAAACAG TTAAAGACGA AGCGTAA
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Protein sequence | MTCYLCYSHS LTNTFMKLIA FDADDTLWAN EPNYIDVKQK MCEMLSHHVD EETLSTRFYD AQIRSLQVFG YGAKSFILSM IETAIELTNG AITGAEIQQI IDTGRKLLDF PIEVLDGVSE VLETLSKQFD LMVLTKGDLF DQESKIARSG LGHYFKHVEI VSEKNEQTYL RILQKYNVQP TDFLMIGNSL KSDILPVIHI GGRAIHIPYA TTWAHEMVAD EQLIGKSFTT LTNARELLEL LETVKDEA
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