Gene Slin_5432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5432 
Symbol 
ID8729199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6604334 
End bp6605155 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content55% 
IMG OID 
ProductNitrilase/cyanide hydratase and apolipoprotein N- acyltransferase 
Protein accessionYP_003390198 
Protein GI284040268 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCA CCCTCCTCCA AACTAACCTG TACTGGCATG ACCCGGTGGC GAACCGCGCC 
ATGCTGGAGG AGCGTATCTT TAACTTACCT GATCCAACAG ACCTGATCGT GCTGCCCGAA
ATGTTCACAA CAGGATTCAC AATGGACGCC CGTGCGGTAG CCGAACCCAT GAATCTGACG
ACGTTTCGGT GGATGAAGCA GATGGCCTCC CAGACGGGGG CAGTAGTGAC CGGGAGTTAC
GTGGTTAAAG AGAATGGAAA TTTCTTCAAC CGACTCATCT GGATGCAGCC CGATGGGCAG
TTTGATACCT ACGACAAACG CCACCTGTTT CGTATGGCGG GCGAAGATAC CGTTTACACA
GCCGGTGCCC AACGAATTGT GAAAGAATGG AAAGGCTGGC GTATCTGCCC GCTTGTCTGC
TACGACCTAC GTTTCCCCGT ATGGAGCCGC AACACCCCCG TACCACCCCA CGTACCGACG
GACTTCAGTC CGTCACCTAA ACCTACCACC TTCGACTACG ACCTGTTGCT GTACGTAGCC
AACTGGCCAG CCGCCCGCCG AAACCCCTGG AACACACTCC TGCAAGCCCG CGCCATCGAA
AACCTAAGTT ATGTTGTCGG CGTCAACCGA GTCGGACAGG ATGGAAACGG GCACCCCTAC
TCCGGCGATT CCGCCGTTAT CGACTTTAAA GGCGAAGTAC TGTTCAGGGA AACAGACGTT
GAAACGGTTC ATCAGCAAAC GCTCTCCCTG GACGAGTTAC GCGCTTTCCG CACCAAATTC
CCGGCCAATC TGGACGCTGA TTCGTTTACG CTCTTGCCTT AG
 
Protein sequence
MNITLLQTNL YWHDPVANRA MLEERIFNLP DPTDLIVLPE MFTTGFTMDA RAVAEPMNLT 
TFRWMKQMAS QTGAVVTGSY VVKENGNFFN RLIWMQPDGQ FDTYDKRHLF RMAGEDTVYT
AGAQRIVKEW KGWRICPLVC YDLRFPVWSR NTPVPPHVPT DFSPSPKPTT FDYDLLLYVA
NWPAARRNPW NTLLQARAIE NLSYVVGVNR VGQDGNGHPY SGDSAVIDFK GEVLFRETDV
ETVHQQTLSL DELRAFRTKF PANLDADSFT LLP